RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SLC35G2Q8TBE7 412 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 TEKT1Q969V4 418 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 CELF4Q9BZC1 486 aaKnown RBP13.36□□□□□ -0.27
NPC1-202ENST00000540608 NYAP2Q9P242 653 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 VAV3Q9UKW4 847 aa13.36□□□□□ -0.27
NPC1-202ENST00000540608 F8VZ95 297 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 EIF3DO15371 548 aaKnown RBP eCLIP13.35□□□□□ -0.27
NPC1-202ENST00000540608 MSH4O15457 936 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 FGGP02679 453 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 TMOD1P28289 359 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 CIITAP33076 1130 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 PPATQ06203 517 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 TCP10Q12799 353 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 PPP2R5EQ16537 467 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 SLC27A3Q5K4L6 730 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 HHIPL2Q6UWX4 724 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 RFFLQ8WZ73 363 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 BCAS3Q9H6U6 928 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 OSGEPQ9NPF4 335 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 CNOT8Q9UFF9 292 aaKnown RBP13.35□□□□□ -0.27
NPC1-202ENST00000540608 RABGAP1Q9Y3P9 1069 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 SPDYE3A6NKU9 549 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 DDX3YO15523 660 aaKnown RBP13.35□□□□□ -0.27
NPC1-202ENST00000540608 PPFIA2O75334 1257 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 MMP14P50281 582 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 EIF3BP55884 814 aaKnown RBP13.35□□□□□ -0.27
NPC1-202ENST00000540608 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 FAM186BQ8IYM0 893 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
NPC1-202ENST00000540608 TXLNGYQ9BZA5 131 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 RAB17Q9H0T7 212 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 PPP1R9AQ9ULJ8 1098 aa13.35□□□□□ -0.27
NPC1-202ENST00000540608 C5orf60A6NFR6 353 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
NPC1-202ENST00000540608 CRKP46108 304 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 SMTNP53814 917 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 PTENP60484 403 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 MAGOHP61326 146 aaKnown RBP13.34□□□□□ -0.27
NPC1-202ENST00000540608 CYP4A11Q02928 519 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 PLS1Q14651 629 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 GLYCTKQ8IVS8 523 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 RAPGEF5Q92565 580 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 MAGOHBQ96A72 148 aaKnown RBP13.34□□□□□ -0.27
NPC1-202ENST00000540608 SYT11Q9BT88 431 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 DPH5Q9H2P9 285 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 DNAJC12Q9UKB3 198 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 DDTLA6NHG4 134 aaPredicted RBP13.34□□□□□ -0.27
NPC1-202ENST00000540608 TRIM37O94972 964 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 SETQ01105 290 aaPredicted RBP13.34□□□□□ -0.27
NPC1-202ENST00000540608 DRAP1Q14919 205 aaPredicted RBP13.34□□□□□ -0.27
NPC1-202ENST00000540608 SLC15A2Q16348 729 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 CCDC121Q6ZUS5 278 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 ARMC9Q7Z3E5 817 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 CCDC13Q8IYE1 715 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 ATP8B4Q8TF62 1192 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 CTNNBL1Q8WYA6 563 aaPredicted RBP13.34□□□□□ -0.27
NPC1-202ENST00000540608 NAP1L3Q99457 506 aaPredicted RBP13.34□□□□□ -0.27
NPC1-202ENST00000540608 MKNK1Q9BUB5 465 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 CARD9Q9H257 536 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 ACTR5Q9H9F9 607 aaPredicted RBP13.34□□□□□ -0.27
NPC1-202ENST00000540608 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 NR2E1Q9Y466 385 aa13.34□□□□□ -0.27
NPC1-202ENST00000540608 SFI1A8K8P3 1242 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 FMO5P49326 533 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 SNAP25P60880 206 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 KRT71Q3SY84 523 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 DCAF12L1Q5VU92 463 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 FBXO11Q86XK2 927 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 FMNL3Q8IVF7 1028 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 PSMD1Q99460 953 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 FMO2Q99518 471 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.27
NPC1-202ENST00000540608 RGL1Q9NZL6 768 aa13.33□□□□□ -0.27
NPC1-202ENST00000540608 ZMYM2Q9UBW7 1377 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 SIPA1L1O43166 1804 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 DCDC2CA8MYV0 355 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 G3V3G9 751 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 EML1O00423 815 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 CCDC172P0C7W6 258 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 DR1Q01658 176 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 CLUL1Q15846 466 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 QPCTQ16769 361 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 KCTD19Q17RG1 926 aaPredicted RBP13.33□□□□□ -0.28
NPC1-202ENST00000540608 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 DUPD1Q68J44 220 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 SIAH1Q8IUQ4 282 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 TLCD1Q96CP7 247 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 SEC16BQ96JE7 1060 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 ERP44Q9BS26 406 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 TRIM51Q9BSJ1 452 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 GPR88Q9GZN0 384 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 NRXN2Q9P2S2 1712 aa13.33□□□□□ -0.28
NPC1-202ENST00000540608 RASSF9O75901 435 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 FAM13AO94988 1023 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 CYP3A4P08684 503 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 POLD1P28340 1107 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 IFFO1Q0D2I5 559 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 CERKLQ49MI3 558 aaPredicted RBP13.32□□□□□ -0.28
NPC1-202ENST00000540608 C1orf186Q6ZWK4 172 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms