RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TLDC1Q6P9B6 456 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 PUS3Q9BZE2 481 aaKnown RBP11.87□□□□□ -0.51
PBX1-212ENST00000540236 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 ATXN2Q99700 1313 aaKnown RBP11.87□□□□□ -0.51
PBX1-212ENST00000540236 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 SPTLC1O15269 473 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 KLRC1P26715 233 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 CABP4P57796 275 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 INHBEP58166 350 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 CTAGE3PQ8IX95 158 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 HSPBAP1Q96EW2 488 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 HEMGNQ9BXL5 484 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 DDX56Q9NY93 547 aaKnown RBP11.87□□□□□ -0.51
PBX1-212ENST00000540236 SH3GLB1Q9Y371 365 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 ZNF609O15014 1411 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 E2F6O75461 281 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 ACTN1P12814 892 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 RPS6P62753 249 aaKnown RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 KRT80Q6KB66 452 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 C18orf8Q96DM3 657 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 LRGUKQ96M69 825 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 MAP3K14Q99558 947 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 RNPEPL1Q9HAU8 725 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 CNGB3Q9NQW8 809 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 THEGQ9P2T0 379 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 NOP56O00567 594 aaKnown RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 ASAP2O43150 1006 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 PEX1O43933 1283 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 ACADSP16219 412 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 PTPREP23469 700 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 IFIT5Q13325 482 aaKnown RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 TRIP10Q15642 601 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 RMDN2Q96LZ7 410 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 CATSPER2Q96P56 530 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 TRAPPC9Q96Q05 1148 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 CYLDQ9NQC7 956 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 ZNF18P17022 549 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 CYP7A1P22680 504 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 BYSLQ13895 437 aaKnown RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 PALB2Q86YC2 1186 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 MKNK2Q9HBH9 465 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 LAMC1P11047 1609 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 BMP15O95972 392 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 GSTA2P09210 222 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 EEF1B2P24534 225 aaKnown RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 ABL2P42684 1182 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 YWHAGP61981 247 aaKnown RBP eCLIP11.86□□□□□ -0.51
PBX1-212ENST00000540236 TBC1D10BQ4KMP7 808 aaPredicted RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 ZC2HC1CQ53FD0 456 aaPredicted RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 DAB2IPQ5VWQ8 1189 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 CAPSLQ8WWF8 208 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 MTA3Q9BTC8 594 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 EBF2Q9HAK2 575 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 CEP152O94986 1710 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 F8VZ95 297 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 SH2B2O14492 632 aaPredicted RBP11.86□□□□□ -0.51
PBX1-212ENST00000540236 SLC5A9Q2M3M2 681 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 PRR16Q569H4 304 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 AADACL2Q6P093 401 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 SFR1Q86XK3 245 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 CATSPER3Q86XQ3 398 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 NUP85Q9BW27 656 aa11.86□□□□□ -0.51
PBX1-212ENST00000540236 C2orf71A6NGG8 1288 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 ZNF76P36508 570 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 ARHGAP4P98171 946 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 IRGCQ6NXR0 463 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 CRELD2Q6UXH1 353 aaPredicted RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 LDHAL6AQ6ZMR3 332 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 AGR3Q8TD06 166 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 MAGEC3Q8TD91 643 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 RABL2AQ9UBK7 228 aaPredicted RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 ZFYVE9O95405 1425 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 INO80Q9ULG1 1556 aaPredicted RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 A0A087X0B3 334 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 LIN7AO14910 233 aaPredicted RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 COQ9O75208 318 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 TOM1L1O75674 476 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 KCNJ1P48048 391 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 ARFIP2P53365 341 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 SREK1Q8WXA9 508 aaKnown RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 MTMR8Q96EF0 704 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 SAYSD1Q9NPB0 183 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 RTCBQ9Y3I0 505 aaKnown RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 ACEP12821 1306 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 GRID2IPA4D2P6 1211 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 B2RBV5 119 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 AP3B1O00203 1094 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 PLEKHA8P1O95397 391 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 BPIFB4P59827 614 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 PRAMEP78395 509 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 C10orf76Q5T2E6 689 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 PATL1Q86TB9 770 aaKnown RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 ANKMY2Q8IV38 441 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 RAVER1Q8IY67 606 aaKnown RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 IL17REQ8NFR9 667 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 RAPGEF4Q8WZA2 1011 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 FERMT1Q9BQL6 677 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms