RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 ZNF236Q9UL36 1845 aa4.86□□□□□ -1.63
C2CD3-214ENST00000540057 USP34Q70CQ2 3546 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 ANKRD33BA6NCL7 494 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 EPOPA6NHQ4 379 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 LRRC10BA6NIK2 292 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 C19orf81C9J6K1 198 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 GRM8O00222 908 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 CBX7O95931 251 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 PGK1P00558 417 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 IFIT1P09914 478 aaKnown RBP4.85□□□□□ -1.63
C2CD3-214ENST00000540057 ALADP13716 330 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 SLC5A1P13866 664 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 AFMP43652 599 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 CCNA1P78396 465 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 TNK2Q07912 1038 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 MLANAQ16655 118 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 BEND3Q5T5X7 828 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 SND1Q7KZF4 910 aaKnown RBP eCLIP4.85□□□□□ -1.63
C2CD3-214ENST00000540057 NPAS4Q8IUM7 802 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 FAM178BQ8IXR5 827 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 TMEM199Q8N511 208 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 KAZALD1Q96I82 304 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 SUCLG2Q96I99 432 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 XPNPEP3Q9NQH7 507 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 BTBD7Q9P203 1132 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 SALL1Q9NSC2 1324 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 SIPA1L1O43166 1804 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 CACNA1FO60840 1977 aa4.85□□□□□ -1.63
C2CD3-214ENST00000540057 ZNFX1Q9P2E3 1918 aaKnown RBP4.84□□□□□ -1.63
C2CD3-214ENST00000540057 F6X3S4 739 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 FGBP02675 491 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 ESR1P03372 595 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 PGRP06401 933 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 GLI1P08151 1106 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 CTSHP09668 335 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 RARBP10826 455 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 ADORA2AP29274 412 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 GDNFP39905 211 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 BTDP43251 543 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 KIR3DL1P43629 444 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 RHBDL3P58872 404 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 PUM3Q15397 648 aaKnown RBP4.84□□□□□ -1.63
C2CD3-214ENST00000540057 SHROOM1Q2M3G4 852 aaPredicted RBP4.84□□□□□ -1.63
C2CD3-214ENST00000540057 ZNF746Q6NUN9 644 aaPredicted RBP4.84□□□□□ -1.63
C2CD3-214ENST00000540057 OTOP2Q7RTS6 562 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 RNF180Q86T96 592 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 DPP9Q86TI2 863 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 CDH24Q86UP0 819 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 KSR1Q8IVT5 923 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 PHC3Q8NDX5 983 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 PRSS33Q8NF86 280 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 PPP1R13LQ8WUF5 828 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 ACSF2Q96CM8 615 aaPredicted RBP4.84□□□□□ -1.63
C2CD3-214ENST00000540057 KIRREL1Q96J84 757 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 TMEM87BQ96K49 555 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 COX4I2Q96KJ9 171 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 FAM84AQ96KN4 292 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 Q96M66 194 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 ALPK1Q96QP1 1244 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 PCGF6Q9BYE7 350 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 MIR1-1HGQ9H1L0 117 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 CERS4Q9HA82 394 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 IL23AQ9NPF7 189 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 STARD7Q9NQZ5 370 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 TLR6Q9Y2C9 796 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 PCDHA11Q9Y5I1 949 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 TRANK1O15050 2925 aa4.84□□□□□ -1.63
C2CD3-214ENST00000540057 C5orf42Q9H799 3197 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 GPR75-ASB3A0A0A6YYF3 556 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 WASH4PA8MWX3 477 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 DCXO43602 365 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 CA3P07451 260 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 ASNSP08243 561 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 IL9P15248 144 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 CYP2C18P33260 490 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 CDK7P50613 346 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 ACLYP53396 1101 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 DAB2P98082 770 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 CALD1Q05682 793 aaKnown RBP4.83□□□□□ -1.64
C2CD3-214ENST00000540057 TSNAXIP1Q2TAA8 658 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 TWISTNBQ3B726 338 aaPredicted RBP4.83□□□□□ -1.64
C2CD3-214ENST00000540057 SLC6A19Q695T7 634 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 LBX2Q6XYB7 198 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 DNAJC14Q6Y2X3 702 aaPredicted RBP4.83□□□□□ -1.64
C2CD3-214ENST00000540057 CATSPERGQ6ZRH7 1159 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 PRR23BQ6ZRT6 265 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 MCATQ8IVS2 390 aaKnown RBP4.83□□□□□ -1.64
C2CD3-214ENST00000540057 BHLHE22Q8NFJ8 381 aaPredicted RBP4.83□□□□□ -1.64
C2CD3-214ENST00000540057 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.83□□□□□ -1.64
C2CD3-214ENST00000540057 KLHDC4Q8TBB5 520 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 TSR2Q969E8 191 aaKnown RBP4.83□□□□□ -1.64
C2CD3-214ENST00000540057 UBE2FQ969M7 185 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 C12orf42Q96LP6 360 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 MTIF3Q9H2K0 278 aaKnown RBP4.83□□□□□ -1.64
C2CD3-214ENST00000540057 FAM53CQ9NYF3 392 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 PARP2Q9UGN5 583 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 HERC5Q9UII4 1024 aaKnown RBP4.83□□□□□ -1.64
C2CD3-214ENST00000540057 ADAM30Q9UKF2 790 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 CORINQ9Y5Q5 1042 aa4.83□□□□□ -1.64
C2CD3-214ENST00000540057 COL4A4P53420 1690 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms