RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TMEM143Q96AN5 459 aa20.43■□□□□ 0.86
SNRPA1-203ENST00000540017 RAD9AQ99638 391 aa20.43■□□□□ 0.86
SNRPA1-203ENST00000540017 XPNPEP1Q9NQW7 623 aa20.43■□□□□ 0.86
SNRPA1-203ENST00000540017 LRWD1Q9UFC0 647 aa20.43■□□□□ 0.86
SNRPA1-203ENST00000540017 PPME1Q9Y570 386 aa20.43■□□□□ 0.86
SNRPA1-203ENST00000540017 LAD1O00515 517 aa20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 DARSP14868 501 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 FGFR4P22455 802 aa20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 EIF4BP23588 611 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 HTRA4P83105 476 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 RESTQ13127 1097 aa20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 RHPN2Q8IUC4 686 aa20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 CRIPAKQ8N1N5 446 aa20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 NLRP7Q8WX94 980 aa20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 JPH2Q9BR39 696 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 TSPYL2Q9H2G4 693 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 PRDM12Q9H4Q4 367 aa20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 MTMR6Q9Y217 621 aa20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 EYSQ5T1H1 3165 aa20.42■□□□□ 0.86
SNRPA1-203ENST00000540017 A0A087WZ62 844 aa20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 GPR182O15218 404 aa20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 CDC25AP30304 524 aa20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 FAM173BQ6P4H8 233 aa20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 DTHD1Q6ZMT9 781 aa20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 ERMNQ8TAM6 284 aa20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 PRPF31Q8WWY3 499 aaKnown RBP20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 SCLT1Q96NL6 688 aa20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 FDXACB1Q9BRP7 624 aaPredicted RBP20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 FTHL17Q9BXU8 183 aa20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 CERS4Q9HA82 394 aa20.41■□□□□ 0.86
SNRPA1-203ENST00000540017 XRCC6P12956 609 aaKnown RBP eCLIP20.4■□□□□ 0.86
SNRPA1-203ENST00000540017 CCT6AP40227 531 aaKnown RBP20.4■□□□□ 0.86
SNRPA1-203ENST00000540017 TTC3P53804 2025 aa20.4■□□□□ 0.86
SNRPA1-203ENST00000540017 DSC3Q14574 896 aa20.4■□□□□ 0.86
SNRPA1-203ENST00000540017 ZNF710Q8N1W2 664 aa20.4■□□□□ 0.86
SNRPA1-203ENST00000540017 ADAM2Q99965 735 aa20.4■□□□□ 0.86
SNRPA1-203ENST00000540017 MMTAG2Q9BU76 263 aaKnown RBP20.4■□□□□ 0.86
SNRPA1-203ENST00000540017 INSL6Q9Y581 213 aa20.4■□□□□ 0.86
SNRPA1-203ENST00000540017 COL4A3BPQ9Y5P4 624 aa20.4■□□□□ 0.86
SNRPA1-203ENST00000540017 LINC01553A4QN01 128 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 EPOPA6NHQ4 379 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 STX6O43752 255 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 EXOC8Q8IYI6 725 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 SP7Q8TDD2 431 aaPredicted RBP20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 SNX29Q8TEQ0 813 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 NLRP4Q96MN2 994 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 NACC1Q96RE7 527 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 MTRQ99707 1265 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 IFT122Q9HBG6 1241 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 DBR1Q9UK59 544 aaKnown RBP20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 STXBP5LQ9Y2K9 1186 aa20.39■□□□□ 0.85
SNRPA1-203ENST00000540017 COL4A6Q14031 1691 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 VWA3AA6NCI4 1184 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 RFXAPO00287 272 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 USO1O60763 962 aaKnown RBP20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 CDC42EP1Q00587 391 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 LAMTOR4Q0VGL1 99 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 ADGRE1Q14246 886 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 SF3A1Q15459 793 aaKnown RBP20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 ODR4Q5SWX8 454 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 HAUS3Q68CZ6 603 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 ZNF410Q86VK4 478 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 SPRYD3Q8NCJ5 442 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 PSPC1Q8WXF1 523 aaKnown RBP20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 YME1L1Q96TA2 773 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 GCOM2Q9BZD3 368 aaPredicted RBP20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 RC3H2Q9HBD1 1191 aaKnown RBP20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 ATP6V0A4Q9HBG4 840 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 RGS18Q9NS28 235 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 CLIC4Q9Y696 253 aa20.38■□□□□ 0.85
SNRPA1-203ENST00000540017 C9IYK1 514 aa20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 GAS2O43903 313 aaKnown RBP20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 DGAT1O75907 488 aa20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 SRGAP2CP0DJJ0 459 aa20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 MUTP22033 750 aa20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 ARL6IP4Q66PJ3 421 aaKnown RBP20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 ASAP3Q8TDY4 903 aa20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 TCP11Q8WWU5 503 aa20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 CCDC43Q96MW1 224 aaKnown RBP20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 RAB34Q9BZG1 259 aa20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 MINDY3Q9H8M7 445 aa20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 DDX19AQ9NUU7 478 aaKnown RBP20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 KIAA1024Q9UPX6 916 aa20.37■□□□□ 0.85
SNRPA1-203ENST00000540017 DENND3A2RUS2 1198 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 DGKIO75912 1065 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 IBSPP21815 317 aaPredicted RBP20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 ARL2P36404 184 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 SARSP49591 514 aaKnown RBP20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 GATMP50440 423 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 GRIN1Q05586 938 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 MAEAQ7L5Y9 396 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 KCNK18Q7Z418 384 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 NPAS4Q8IUM7 802 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 ARNTL2Q8WYA1 636 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 ZNF689Q96CS4 500 aaPredicted RBP20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 GPRC5CQ9NQ84 441 aa20.36■□□□□ 0.85
SNRPA1-203ENST00000540017 FAM189BP81408 668 aa20.35■□□□□ 0.85
SNRPA1-203ENST00000540017 PTPAQ15257 358 aa20.35■□□□□ 0.85
SNRPA1-203ENST00000540017 KRT79Q5XKE5 535 aa20.35■□□□□ 0.85
SNRPA1-203ENST00000540017 PADI6Q6TGC4 694 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms