RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ADAM15Q13444 863 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 FAM102BQ5T8I3 360 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 RSPH1Q8WYR4 309 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 WASF1Q92558 559 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 GCOM2Q9BZD3 368 aaPredicted RBP17.21■□□□□ 0.35
UBE3B-211ENST00000539843 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.35
UBE3B-211ENST00000539843 CD320Q9NPF0 282 aa17.21■□□□□ 0.35
UBE3B-211ENST00000539843 DDX25Q9UHL0 483 aaKnown RBP17.21■□□□□ 0.35
UBE3B-211ENST00000539843 XIRP2A4UGR9 3374 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 FAM86C2PA6NEL3 165 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 ADAMTS3O15072 1205 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 ZNF862O60290 1169 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 TBX10O75333 385 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 FGFR1P11362 822 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 GCFC2P16383 781 aaKnown RBP17.2■□□□□ 0.34
UBE3B-211ENST00000539843 LTBRP36941 435 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 GPC3P51654 580 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 ANKRD1Q15327 319 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 MTERF2Q49AM1 385 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 RBM23Q86U06 439 aaKnown RBP17.2■□□□□ 0.34
UBE3B-211ENST00000539843 EXOC8Q8IYI6 725 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 COLGALT1Q8NBJ5 622 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 RNF169Q8NCN4 708 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 ZNF558Q96NG5 402 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 MRPL9Q9BYD2 267 aaKnown RBP17.2■□□□□ 0.34
UBE3B-211ENST00000539843 BRMS1Q9HCU9 246 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 ENTPD7Q9NQZ7 604 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 TYW1Q9NV66 732 aaKnown RBP17.2■□□□□ 0.34
UBE3B-211ENST00000539843 LZTS1Q9Y250 596 aa17.2■□□□□ 0.34
UBE3B-211ENST00000539843 MYH9P35579 1960 aaKnown RBP17.19■□□□□ 0.34
UBE3B-211ENST00000539843 CYP3A7-CYP3A51PA0A087WV96 503 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 PSMD10O75832 226 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 TDP2O95551 362 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 SKIP12755 728 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 DARSP14868 501 aaKnown RBP17.19■□□□□ 0.34
UBE3B-211ENST00000539843 CYP3A7P24462 503 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 IRS1P35568 1242 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 FAM189BP81408 668 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 CAMK1Q14012 370 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 DSC3Q14574 896 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 LINC01465Q8N7H1 131 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 ADAMTS10Q9H324 1103 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 CHST12Q9NRB3 414 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 RAPGEFL1Q9UHV5 662 aa17.19■□□□□ 0.34
UBE3B-211ENST00000539843 LINC01565O15544 149 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 EOMESO95936 686 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 DNAJB1P25685 340 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 GTF2F1P35269 517 aaKnown RBP eCLIP17.18■□□□□ 0.34
UBE3B-211ENST00000539843 PSMC5P62195 406 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 DLX2Q07687 328 aaPredicted RBP17.18■□□□□ 0.34
UBE3B-211ENST00000539843 UGCGQ16739 394 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 INF2Q27J81 1249 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 LETM2Q2VYF4 491 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 NEK8Q86SG6 692 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 ZNF410Q86VK4 478 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 TMEM87AQ8NBN3 555 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 MRPS27Q92552 414 aaKnown RBP17.18■□□□□ 0.34
UBE3B-211ENST00000539843 KHSRPQ92945 711 aaKnown RBP eCLIP17.18■□□□□ 0.34
UBE3B-211ENST00000539843 FAM20AQ96MK3 541 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 NIFKQ9BYG3 293 aaKnown RBP17.18■□□□□ 0.34
UBE3B-211ENST00000539843 NGRNQ9NPE2 291 aaKnown RBP17.18■□□□□ 0.34
UBE3B-211ENST00000539843 STK36Q9NRP7 1315 aa17.18■□□□□ 0.34
UBE3B-211ENST00000539843 C19orf67A6NJJ6 358 aa17.17■□□□□ 0.34
UBE3B-211ENST00000539843 DDX11L8A8MPP1 907 aa17.17■□□□□ 0.34
UBE3B-211ENST00000539843 PLCB3Q01970 1234 aa17.17■□□□□ 0.34
UBE3B-211ENST00000539843 COASYQ13057 564 aa17.17■□□□□ 0.34
UBE3B-211ENST00000539843 ADGRD2Q7Z7M1 963 aa17.17■□□□□ 0.34
UBE3B-211ENST00000539843 ECHDC2Q86YB7 292 aa17.17■□□□□ 0.34
UBE3B-211ENST00000539843 SLC7A3Q8WY07 619 aa17.17■□□□□ 0.34
UBE3B-211ENST00000539843 TCF25Q9BQ70 676 aa17.17■□□□□ 0.34
UBE3B-211ENST00000539843 PPME1Q9Y570 386 aa17.17■□□□□ 0.34
UBE3B-211ENST00000539843 A0A0U1RQF3 1178 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 BAG4O95429 457 aaKnown RBP17.16■□□□□ 0.34
UBE3B-211ENST00000539843 EYA4O95677 639 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 RAB27AP51159 221 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 TARBP2Q15633 366 aaKnown RBP17.16■□□□□ 0.34
UBE3B-211ENST00000539843 PLPP4Q5VZY2 271 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 TWF2Q6IBS0 349 aaKnown RBP17.16■□□□□ 0.34
UBE3B-211ENST00000539843 KCNT2Q6UVM3 1135 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 RHPN2Q8IUC4 686 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 SMRP1Q8NCR6 262 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 ETNPPLQ8TBG4 499 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 ZNF668Q96K58 619 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-211ENST00000539843 MBOAT7Q96N66 472 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 LARP6Q9BRS8 491 aaKnown RBP17.16■□□□□ 0.34
UBE3B-211ENST00000539843 SPG21Q9NZD8 308 aa17.16■□□□□ 0.34
UBE3B-211ENST00000539843 SUCLA2Q9P2R7 463 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-211ENST00000539843 CCNT1O60563 726 aaKnown RBP17.15■□□□□ 0.34
UBE3B-211ENST00000539843 CA8P35219 290 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 QARSP47897 775 aaKnown RBP17.15■□□□□ 0.34
UBE3B-211ENST00000539843 ALDH7A1P49419 539 aaKnown RBP17.15■□□□□ 0.34
UBE3B-211ENST00000539843 POLGP54098 1239 aaPredicted RBP17.15■□□□□ 0.34
UBE3B-211ENST00000539843 ANAPC15P60006 121 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 DUSP6Q16828 381 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 PPP4R3AQ6IN85 833 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 OTUD6AQ7L8S5 288 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 CATSPER4Q7RTX7 472 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 TMC7Q7Z402 723 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 SLFN12Q8IYM2 578 aa17.15■□□□□ 0.34
UBE3B-211ENST00000539843 GJA10Q969M2 543 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms