RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 NT5C1B-RDH14C9J2C7 533 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 GAS2O43903 313 aaKnown RBP8.49□□□□□ -1.05
GNE-205ENST00000539815 MARCKSP29966 332 aaPredicted RBP8.49□□□□□ -1.05
GNE-205ENST00000539815 TFDP1Q14186 410 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 PRR16Q569H4 304 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 ASTLQ6HA08 431 aaPredicted RBP8.49□□□□□ -1.05
GNE-205ENST00000539815 OTUD6AQ7L8S5 288 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 NCAPGQ9BPX3 1015 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 IL17RBQ9NRM6 502 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 RBM28Q9NW13 759 aaKnown RBP8.49□□□□□ -1.05
GNE-205ENST00000539815 A0A0D9SFI3 127 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 MMP1P03956 469 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 ITGB1P05556 798 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 WEE2P0C1S8 567 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 ADAM15Q13444 863 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 PTPN14Q15678 1187 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 CCDC62Q6P9F0 684 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 RASGRP2Q7LDG7 609 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 ENAHQ8N8S7 591 aaPredicted RBP8.49□□□□□ -1.05
GNE-205ENST00000539815 SPPL3Q8TCT6 385 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 DSCC1Q9BVC3 393 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 TEKT3Q9BXF9 490 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 IGSF9Q9P2J2 1179 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 ANAPC4Q9UJX5 808 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 F5P12259 2224 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 IGKV6D-41A0A0C4DH26 115 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 RXRAP19793 462 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 ACTR2P61160 394 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 SAFBQ15424 915 aaKnown RBP eCLIP8.49□□□□□ -1.05
GNE-205ENST00000539815 TMEM87BQ96K49 555 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 GCNAQ96QF7 691 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 GRPEL1Q9HAV7 217 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.49□□□□□ -1.05
GNE-205ENST00000539815 GON4LQ3T8J9 2241 aa8.49□□□□□ -1.05
GNE-205ENST00000539815 ICAM3P32942 547 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 KRT32Q14532 448 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 UBE2SQ16763 222 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 PPM1LQ5SGD2 360 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 EFCAB12Q6NXP0 572 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 FRMD5Q7Z6J6 570 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 USP37Q86T82 979 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 C12orf76Q8N812 135 aaPredicted RBP8.48□□□□□ -1.05
GNE-205ENST00000539815 KAT2BQ92831 832 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 CD320Q9NPF0 282 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 GABBR1Q9UBS5 961 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 FEZ2Q9UHY8 353 aaPredicted RBP8.48□□□□□ -1.05
GNE-205ENST00000539815 hCG_1642624A0A1W2PR95 340 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 WDR64B1ANS9 1081 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 ATP2B1P20020 1258 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 RAB27AP51159 221 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 CEP55Q53EZ4 464 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 CYP4A22Q5TCH4 519 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 FAM177A1Q8N128 213 aaPredicted RBP8.48□□□□□ -1.05
GNE-205ENST00000539815 REXO1Q8N1G1 1221 aaKnown RBP8.48□□□□□ -1.05
GNE-205ENST00000539815 MYL10Q9BUA6 226 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 PCDHA10Q9Y5I2 948 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 GALR2O43603 387 aaPredicted RBP8.48□□□□□ -1.05
GNE-205ENST00000539815 DDAH1O94760 285 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 SRGAP2CP0DJJ0 459 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 ITGA4P13612 1032 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 LPIN1Q14693 890 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 STOX1Q6ZVD7 989 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 CHD1LQ86WJ1 897 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 STAG2Q8N3U4 1231 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 CNNM3Q8NE01 707 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 HELQQ8TDG4 1101 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 CSGALNACT1Q8TDX6 532 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 MORC4Q8TE76 937 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 ATP8B4Q8TF62 1192 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 TRAPPC12Q8WVT3 735 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 SFXN1Q9H9B4 322 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 SIT1Q9Y3P8 196 aa8.48□□□□□ -1.05
GNE-205ENST00000539815 V9GY48 417 aaPredicted RBP8.48□□□□□ -1.05
GNE-205ENST00000539815 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 SMIM35A0A1B0GVV1 85 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 PRRG1O14668 218 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 LRG1P02750 347 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 VTNP04004 478 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 EDNRBP24530 442 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 MSNP26038 577 aaKnown RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 GTF2F1P35269 517 aaKnown RBP eCLIP8.47□□□□□ -1.05
GNE-205ENST00000539815 SPRED2Q7Z698 418 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 TTC30AQ86WT1 665 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 RHPN2Q8IUC4 686 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 ZBTB8OSQ8IWT0 167 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 NELL2Q99435 816 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 BRD9Q9H8M2 597 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 RSPH14Q9UHP6 348 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 SQORQ9Y6N5 450 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 NCOR2Q9Y618 2525 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 MAP1BP46821 2468 aaKnown RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 ZNF318Q5VUA4 2279 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 LINC01565O15544 149 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 EIF4BP23588 611 aaKnown RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 CLCN5P51795 746 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 CRYBB1P53674 252 aaPredicted RBP8.47□□□□□ -1.05
GNE-205ENST00000539815 LMNB2Q03252 620 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 PLCB4Q15147 1175 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 PCNX4Q63HM2 1172 aa8.47□□□□□ -1.05
GNE-205ENST00000539815 ANKRD54Q6NXT1 300 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms