RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 DMP1Q13316 513 aaPredicted RBP17.84■□□□□ 0.45
TRAF3-204ENST00000539721 EPM2AIP1Q7L775 607 aaPredicted RBP17.84■□□□□ 0.45
TRAF3-204ENST00000539721 NELFCDQ8IXH7 590 aa17.84■□□□□ 0.45
TRAF3-204ENST00000539721 FIZ1Q96SL8 496 aa17.84■□□□□ 0.45
TRAF3-204ENST00000539721 JPH2Q9BR39 696 aaPredicted RBP17.84■□□□□ 0.45
TRAF3-204ENST00000539721 C17orf75Q9HAS0 396 aa17.84■□□□□ 0.45
TRAF3-204ENST00000539721 XPNPEP3Q9NQH7 507 aa17.84■□□□□ 0.45
TRAF3-204ENST00000539721 EIF3DO15371 548 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRAF3-204ENST00000539721 PRPF6O94906 941 aaKnown RBP17.83■□□□□ 0.44
TRAF3-204ENST00000539721 MAPTP10636 758 aaKnown RBP17.83■□□□□ 0.44
TRAF3-204ENST00000539721 PMS1P54277 932 aaKnown RBP17.83■□□□□ 0.44
TRAF3-204ENST00000539721 RTP1P59025 263 aa17.83■□□□□ 0.44
TRAF3-204ENST00000539721 CHMP4BP1P59074 171 aa17.83■□□□□ 0.44
TRAF3-204ENST00000539721 PLCB2Q00722 1185 aa17.83■□□□□ 0.44
TRAF3-204ENST00000539721 ZNF720Q7Z2F6 126 aa17.83■□□□□ 0.44
TRAF3-204ENST00000539721 KAT2BQ92831 832 aa17.83■□□□□ 0.44
TRAF3-204ENST00000539721 IFT74Q96LB3 600 aa17.83■□□□□ 0.44
TRAF3-204ENST00000539721 SEMA6BQ9H3T3 888 aa17.83■□□□□ 0.44
TRAF3-204ENST00000539721 FANCLQ9NW38 375 aa17.83■□□□□ 0.44
TRAF3-204ENST00000539721 DDX20Q9UHI6 824 aaKnown RBP17.83■□□□□ 0.44
TRAF3-204ENST00000539721 CCDC169A6NNP5 214 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 GAS2O43903 313 aaKnown RBP17.82■□□□□ 0.44
TRAF3-204ENST00000539721 KPNA6O60684 536 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 PSEN2P49810 448 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 SMTNP53814 917 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 PPFIA1Q13136 1202 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 MFSD10Q14728 455 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 KIAA0753Q2KHM9 967 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 ZC2HC1CQ53FD0 456 aaPredicted RBP17.82■□□□□ 0.44
TRAF3-204ENST00000539721 GNASQ5JWF2 1037 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 CENPPQ6IPU0 288 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 SLC17A8Q8NDX2 589 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 ZNF507Q8TCN5 953 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 TCP11Q8WWU5 503 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 BSNDQ8WZ55 320 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 TSG101Q99816 390 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 KATNAL1Q9BW62 490 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 SUGCTQ9HAC7 445 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 PCDHB13Q9Y5F0 798 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 UBE4BO95155 1302 aa17.82■□□□□ 0.44
TRAF3-204ENST00000539721 ZEB2O60315 1214 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 ADAMTS4O75173 837 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 ARL2P36404 184 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 NCKAP1LP55160 1127 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 PURAQ00577 322 aaKnown RBP17.81■□□□□ 0.44
TRAF3-204ENST00000539721 BMT2Q1RMZ1 405 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 IER5Q5VY09 327 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 ANKRD40Q6AI12 368 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 TTI2Q6NXR4 508 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 SPIRE2Q8WWL2 714 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 HSD3B7Q9H2F3 369 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 HMX1Q9NP08 348 aaPredicted RBP17.81■□□□□ 0.44
TRAF3-204ENST00000539721 KMT5AQ9NQR1 393 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 PTPN22Q9Y2R2 807 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 EVPLQ92817 2033 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 IGKV6-21A0A0C4DH24 114 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 SLC16A4O15374 487 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 C22orf31O95567 290 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 NPTX2P47972 431 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 NKX3-2P78367 333 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 LRRC63Q05C16 580 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 ALCAMQ13740 583 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 GRIK4Q16099 956 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 LRRC71Q8N4P6 559 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 RETREG2Q8NC44 543 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 ASAP3Q8TDY4 903 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 ANP32BQ92688 251 aaKnown RBP17.81■□□□□ 0.44
TRAF3-204ENST00000539721 KCNG1Q9UIX4 513 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 FRMPD3Q5JV73 1810 aa17.81■□□□□ 0.44
TRAF3-204ENST00000539721 HAS3O00219 553 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 MAGEB2O15479 319 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 MYCNP04198 464 aaPredicted RBP17.8■□□□□ 0.44
TRAF3-204ENST00000539721 SMIM10L2AP0DMW4 78 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 SMIM10L2BP0DMW5 78 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 GLRA2P23416 452 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 KLRC1P26715 233 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 PPP2R5AQ15172 486 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 KNOP1Q1ED39 458 aaKnown RBP17.8■□□□□ 0.44
TRAF3-204ENST00000539721 HSP90AA4PQ58FG1 418 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 EFCAB12Q6NXP0 572 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 HAUS6Q7Z4H7 955 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 METTL13Q8N6R0 699 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 SH3TC2Q8TF17 1288 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 DUSP9Q99956 384 aaKnown RBP17.8■□□□□ 0.44
TRAF3-204ENST00000539721 KCTD10Q9H3F6 313 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 ST6GALNAC4Q9H4F1 302 aa17.8■□□□□ 0.44
TRAF3-204ENST00000539721 SAMSN1Q9NSI8 373 aaKnown RBP17.8■□□□□ 0.44
TRAF3-204ENST00000539721 RRN3P2A6NIE6 340 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 MSCO60682 206 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 PPP1R37O75864 691 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 HOXD13P35453 343 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 DNM2P50570 870 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 KCNA1Q09470 495 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 DRP2Q13474 957 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 KSR1Q8IVT5 923 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 CSGALNACT2Q8N6G5 542 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 PSPC1Q8WXF1 523 aaKnown RBP17.79■□□□□ 0.44
TRAF3-204ENST00000539721 ZBTB10Q96DT7 871 aa17.79■□□□□ 0.44
TRAF3-204ENST00000539721 NTPCRQ9BSD7 190 aaKnown RBP17.79■□□□□ 0.44
TRAF3-204ENST00000539721 MTG1Q9BT17 334 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms