RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CEP112Q8N8E3 955 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 ATP6V0A1Q93050 837 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 ANKEF1Q9NU02 776 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 PUF60Q9UHX1 559 aaKnown RBP18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 SYNGAP1Q96PV0 1343 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 RNF225M0QZC1 329 aaPredicted RBP18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 MAP2K7O14733 419 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 DNM2P50570 870 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 LY6KQ17RY6 165 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 MIS18BP1Q6P0N0 1132 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 ANKZF1Q9H8Y5 726 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 GPRC5CQ9NQ84 441 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 SEL1LQ9UBV2 794 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 TRAF3IP3Q9Y228 551 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 MYH11P35749 1972 aa18.74■□□□□ 0.59
PCDHB17P-201ENST00000539533 SUPT20HL2P0C7V6 817 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 FXR1P51114 621 aaKnown RBP eCLIP18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 CCNA1P78396 465 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 TBC1D8BQ0IIM8 1120 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 ZNF569Q5MCW4 686 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 HNRNPLLQ8WVV9 542 aaKnown RBP18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 H3BQF6 201 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 PDXKO00764 312 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 FARP2O94887 1054 aaPredicted RBP18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 ARIH2O95376 493 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 NR2F2P24468 414 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 TUBB2AQ13885 445 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 EDRF1Q3B7T1 1238 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 PPP4R3CPQ6ZMV5 832 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 CNGA4Q8IV77 575 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 CEP63Q96MT8 703 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 TUBB2BQ9BVA1 445 aa18.73■□□□□ 0.59
PCDHB17P-201ENST00000539533 LRRC37A2A6NM11 1700 aa18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 EIF3DO15371 548 aaKnown RBP eCLIP18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 TGFB1I1O43294 461 aa18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 ATG7O95352 703 aa18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 GCLCP48506 637 aaPredicted RBP18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 PRKCEQ02156 737 aa18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 VWA3BQ502W6 1294 aa18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 ZC3H3Q8IXZ2 948 aaKnown RBP18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 CCDC51Q96ER9 411 aa18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 CEP170P1Q96L14 293 aa18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 MPHOSPH6Q99547 160 aaKnown RBP18.72■□□□□ 0.59
PCDHB17P-201ENST00000539533 MCM3APO60318 1980 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 A0A1W2PQC6 194 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 CLIC2O15247 247 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 TGFB3P10600 412 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 ATP4AP20648 1035 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 FECHP22830 423 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 KLK7P49862 253 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 CCDC40Q4G0X9 1142 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 OTUD6AQ7L8S5 288 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 FBXO16Q8IX29 292 aaPredicted RBP18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 NDST4Q9H3R1 872 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 TYW1Q9NV66 732 aaKnown RBP18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 MORF4L1Q9UBU8 362 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 RAB21Q9UL25 225 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 ZMYM2Q9UBW7 1377 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 GSTTP1A0A1W2PQM5 241 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 CTAGE9A4FU28 777 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 GGPS1O95749 300 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 ZNF157P51786 506 aaPredicted RBP18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 GYS2P54840 703 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 NEDD9Q14511 834 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 MAN2A1Q16706 1144 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 BEND6Q5SZJ8 279 aaPredicted RBP18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 FAM102BQ5T8I3 360 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 MSANTD4Q8NCY6 345 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 EXOC4Q96A65 974 aa18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 LARSQ9P2J5 1176 aaKnown RBP18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 SEPT9Q9UHD8 586 aaPredicted RBP18.71■□□□□ 0.59
PCDHB17P-201ENST00000539533 CETN3O15182 167 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 CALUO43852 315 aaPredicted RBP18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 DKC1O60832 514 aaKnown RBP eCLIP18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 ADORA2AP29274 412 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 SOX10P56693 466 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 TMEM63BQ5T3F8 832 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 PNKPQ96T60 521 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 PARK7Q99497 189 aaKnown RBP18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 STRA6Q9BX79 667 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 ZNF302Q9NR11 478 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 ADAM21Q9UKJ8 722 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 IGSF9BQ9UPX0 1349 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 PLS3P13797 630 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 ZSCAN26Q16670 478 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 SLC35F6Q8N357 371 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 PCDHB13Q9Y5F0 798 aa18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 MAFBQ9Y5Q3 323 aaPredicted RBP18.7■□□□□ 0.58
PCDHB17P-201ENST00000539533 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 RASSF10A6NK89 507 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 PPP1R37O75864 691 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 NR3C1P04150 777 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 TUBB4BP68371 445 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 RASAL3Q86YV0 1011 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 ACRBPQ8NEB7 543 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 MORC4Q8TE76 937 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 PCYT2Q99447 389 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 RASSF4Q9H2L5 321 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 MLXIPQ9HAP2 919 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 PDGFCQ9NRA1 345 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms