RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, humanhuman

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-204ENST00000539463 TPH2Q8IWU9 490 aa28.91■■■□□ 2.22
DENR-204ENST00000539463 NLRP7Q8WX94 980 aa28.91■■■□□ 2.22
DENR-204ENST00000539463 SCLT1Q96NL6 688 aa28.91■■■□□ 2.22
DENR-204ENST00000539463 HSD17B14Q9BPX1 270 aa28.91■■■□□ 2.22
DENR-204ENST00000539463 JPH2Q9BR39 696 aaPredicted RBP28.91■■■□□ 2.22
DENR-204ENST00000539463 SUCLA2Q9P2R7 463 aaPredicted RBP28.91■■■□□ 2.22
DENR-204ENST00000539463 LRFN2Q9ULH4 789 aa28.91■■■□□ 2.22
DENR-204ENST00000539463 PRRC2BQ5JSZ5 2229 aaKnown RBP28.91■■■□□ 2.22
DENR-204ENST00000539463 C9IYK1 514 aa28.9■■■□□ 2.22
DENR-204ENST00000539463 H3BNC9 293 aa28.9■■■□□ 2.22
DENR-204ENST00000539463 ZBTB39O15060 712 aa28.9■■■□□ 2.22
DENR-204ENST00000539463 OTUD6AQ7L8S5 288 aa28.9■■■□□ 2.22
DENR-204ENST00000539463 NOSTRINQ8IVI9 506 aa28.9■■■□□ 2.22
DENR-204ENST00000539463 CLP1Q92989 425 aaKnown RBP28.9■■■□□ 2.22
DENR-204ENST00000539463 THEGQ9P2T0 379 aa28.9■■■□□ 2.22
DENR-204ENST00000539463 PPME1Q9Y570 386 aa28.9■■■□□ 2.22
DENR-204ENST00000539463 PCDHB7Q9Y5E2 793 aa28.9■■■□□ 2.22
DENR-204ENST00000539463 IBSPP21815 317 aaPredicted RBP28.89■■■□□ 2.22
DENR-204ENST00000539463 FAM189BP81408 668 aa28.89■■■□□ 2.22
DENR-204ENST00000539463 GNL2Q13823 731 aaKnown RBP28.89■■■□□ 2.22
DENR-204ENST00000539463 CMTR2Q8IYT2 770 aaKnown RBP28.89■■■□□ 2.22
DENR-204ENST00000539463 SLC7A3Q8WY07 619 aa28.89■■■□□ 2.22
DENR-204ENST00000539463 DHX33Q9H6R0 707 aaKnown RBP28.89■■■□□ 2.22
DENR-204ENST00000539463 XIRP2A4UGR9 3374 aa28.88■■■□□ 2.21
DENR-204ENST00000539463 VCANP13611 3396 aa28.88■■■□□ 2.21
DENR-204ENST00000539463 U2AF2P26368 475 aaKnown RBP eCLIP28.88■■■□□ 2.213e-6■□□□□ 9.6
DENR-204ENST00000539463 BMPR1AP36894 532 aa28.88■■■□□ 2.21
DENR-204ENST00000539463 GATMP50440 423 aa28.88■■■□□ 2.21
DENR-204ENST00000539463 GPM6BQ13491 265 aa28.88■■■□□ 2.21
DENR-204ENST00000539463 SKIV2LQ15477 1246 aaKnown RBP28.88■■■□□ 2.21
DENR-204ENST00000539463 ZNF174Q15697 407 aa28.88■■■□□ 2.21
DENR-204ENST00000539463 RHPN2Q8IUC4 686 aa28.88■■■□□ 2.21
DENR-204ENST00000539463 EXOC8Q8IYI6 725 aa28.88■■■□□ 2.21
DENR-204ENST00000539463 ATXN2LQ8WWM7 1075 aaKnown RBP28.88■■■□□ 2.21
DENR-204ENST00000539463 GCOM2Q9BZD3 368 aaPredicted RBP28.88■■■□□ 2.21
DENR-204ENST00000539463 RNF216Q9NWF9 866 aaPredicted RBP28.88■■■□□ 2.21
DENR-204ENST00000539463 A0A087WZ62 844 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 C5orf67F2Z3F1 127 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 CSDE1O75534 798 aaKnown RBP28.87■■■□□ 2.21
DENR-204ENST00000539463 FGFR4P22455 802 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 CTNNB1P35222 781 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 RFC5P40937 340 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 MCM2P49736 904 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 POLGP54098 1239 aaPredicted RBP28.87■■■□□ 2.21
DENR-204ENST00000539463 ORC2Q13416 577 aaPredicted RBP28.87■■■□□ 2.21
DENR-204ENST00000539463 XKR9Q5GH70 373 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 KSR1Q8IVT5 923 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 NEK9Q8TD19 979 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 FDXACB1Q9BRP7 624 aaPredicted RBP28.87■■■□□ 2.21
DENR-204ENST00000539463 RWDD3Q9Y3V2 267 aa28.87■■■□□ 2.21
DENR-204ENST00000539463 MRPL42Q9Y6G3 142 aaKnown RBP28.87■■■□□ 2.21
DENR-204ENST00000539463 LYPLA2O95372 231 aa28.86■■■□□ 2.21
DENR-204ENST00000539463 RB1P06400 928 aa28.86■■■□□ 2.21
DENR-204ENST00000539463 TRAPPC10P48553 1259 aa28.86■■■□□ 2.21
DENR-204ENST00000539463 PAN2Q504Q3 1202 aaKnown RBP28.86■■■□□ 2.21
DENR-204ENST00000539463 TTC38Q5R3I4 469 aa28.86■■■□□ 2.21
DENR-204ENST00000539463 ZNF410Q86VK4 478 aa28.86■■■□□ 2.21
DENR-204ENST00000539463 MRPL38Q96DV4 380 aaKnown RBP28.86■■■□□ 2.21
DENR-204ENST00000539463 COL25A1Q9BXS0 654 aaPredicted RBP28.86■■■□□ 2.21
DENR-204ENST00000539463 POTEMA6NI47 508 aa28.85■■■□□ 2.21
DENR-204ENST00000539463 ZSCAN20P17040 1043 aaPredicted RBP28.85■■■□□ 2.21
DENR-204ENST00000539463 FAM102BQ5T8I3 360 aa28.85■■■□□ 2.21
DENR-204ENST00000539463 TMEM143Q96AN5 459 aa28.85■■■□□ 2.21
DENR-204ENST00000539463 ELAC1Q9H777 363 aaKnown RBP28.85■■■□□ 2.21
DENR-204ENST00000539463 TMEM161AQ9NX61 479 aa28.85■■■□□ 2.21
DENR-204ENST00000539463 KIF3AQ9Y496 699 aa28.85■■■□□ 2.21
DENR-204ENST00000539463 PTPROQ16827 1216 aa28.84■■■□□ 2.21
DENR-204ENST00000539463 PRPF31Q8WWY3 499 aaKnown RBP28.84■■■□□ 2.21
DENR-204ENST00000539463 NLRP4Q96MN2 994 aa28.84■■■□□ 2.21
DENR-204ENST00000539463 BMP2KQ9NSY1 1161 aaPredicted RBP28.84■■■□□ 2.21
DENR-204ENST00000539463 NOL7Q9UMY1 257 aaKnown RBP28.84■■■□□ 2.21
DENR-204ENST00000539463 OR52Z1P0C646 297 aa28.83■■■□□ 2.21
DENR-204ENST00000539463 TECP42680 631 aa28.83■■■□□ 2.21
DENR-204ENST00000539463 MRPS5P82675 430 aaKnown RBP28.83■■■□□ 2.21
DENR-204ENST00000539463 EMC2Q15006 297 aa28.83■■■□□ 2.21
DENR-204ENST00000539463 TJAP1Q5JTD0 557 aa28.83■■■□□ 2.21
DENR-204ENST00000539463 ASB2Q96Q27 587 aa28.83■■■□□ 2.21
DENR-204ENST00000539463 C11orf84Q9BUA3 381 aaPredicted RBP28.83■■■□□ 2.21
DENR-204ENST00000539463 ATP6V0A4Q9HBG4 840 aa28.83■■■□□ 2.21
DENR-204ENST00000539463 ANKEF1Q9NU02 776 aa28.83■■■□□ 2.21
DENR-204ENST00000539463 COL4A3BPQ9Y5P4 624 aa28.83■■■□□ 2.21
DENR-204ENST00000539463 TOB1P50616 345 aaPredicted RBP28.82■■■□□ 2.2
DENR-204ENST00000539463 NBR1Q14596 966 aa28.82■■■□□ 2.2
DENR-204ENST00000539463 C4orf32Q8N8J7 132 aa28.82■■■□□ 2.2
DENR-204ENST00000539463 PSPC1Q8WXF1 523 aaKnown RBP28.82■■■□□ 2.2
DENR-204ENST00000539463 PLVAPQ9BX97 442 aa28.82■■■□□ 2.2
DENR-204ENST00000539463 INO80BQ9C086 356 aaPredicted RBP28.82■■■□□ 2.2
DENR-204ENST00000539463 IFT122Q9HBG6 1241 aa28.82■■■□□ 2.2
DENR-204ENST00000539463 RALGAPA2Q2PPJ7 1873 aa28.82■■■□□ 2.2
DENR-204ENST00000539463 NLRC5Q86WI3 1866 aa28.82■■■□□ 2.2
DENR-204ENST00000539463 GAS2O43903 313 aaKnown RBP28.81■■■□□ 2.2
DENR-204ENST00000539463 SPATA31C1P0DKV0 1188 aa28.81■■■□□ 2.2
DENR-204ENST00000539463 FGFR1P11362 822 aa28.81■■■□□ 2.2
DENR-204ENST00000539463 SFPQP23246 707 aaKnown RBP eCLIP28.81■■■□□ 2.2
DENR-204ENST00000539463 GJB2P29033 226 aa28.81■■■□□ 2.2
DENR-204ENST00000539463 TFF2Q03403 129 aa28.81■■■□□ 2.2
DENR-204ENST00000539463 ECHDC2Q86YB7 292 aa28.81■■■□□ 2.2
DENR-204ENST00000539463 PIGOQ8TEQ8 1089 aa28.81■■■□□ 2.2
DENR-204ENST00000539463 TCP11Q8WWU5 503 aa28.81■■■□□ 2.2
DENR-204ENST00000539463 CHST12Q9NRB3 414 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms