RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 TNFAIP2Q03169 654 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 LAMC2Q13753 1193 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 GRIN2CQ14957 1233 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 DUSP28Q4G0W2 176 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 IQSEC1Q6DN90 963 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 SFR1Q86XK3 245 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 ADSSL1Q8N142 457 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 ATP6V0A1Q93050 837 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 BPIFA3Q9BQP9 254 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 LRRC27Q9C0I9 530 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 ZHX3Q9H4I2 956 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 GPRC5CQ9NQ84 441 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 XPNPEP1Q9NQW7 623 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 PDLIM7Q9NR12 457 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 CTNND2Q9UQB3 1225 aa10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 GNEQ9Y223 722 aaKnown RBP10.17□□□□□ -0.78
RTN4IP1-204ENST00000539449 TRIM49BA6NDI0 452 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 DYNC1LI2O43237 492 aaPredicted RBP10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 OATP04181 439 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 MARK3P27448 753 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 CASP5P51878 434 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 MRPS5P82675 430 aaKnown RBP10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 PLCB4Q15147 1175 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 UVSSAQ2YD98 709 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 MTERF2Q49AM1 385 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 XKR3Q5GH77 459 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 HERC4Q5GLZ8 1057 aaPredicted RBP10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 FAM26FQ5R3K3 315 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 CCDC65Q8IXS2 484 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 OR6J1Q8NGC5 347 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 AFAP1L1Q8TED9 768 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 PPP1R13LQ8WUF5 828 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 NELFBQ8WX92 580 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 PPM1EQ8WY54 764 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 EMID1Q96A84 441 aaPredicted RBP10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 CEP170P1Q96L14 293 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 FIZ1Q96SL8 496 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 IKZF4Q9H2S9 585 aa10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 SEPT9Q9UHD8 586 aaPredicted RBP10.16□□□□□ -0.78
RTN4IP1-204ENST00000539449 ZBTB42B2RXF5 422 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 NOP56O00567 594 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 FAM13AO94988 1023 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 LGALS2P05162 132 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 MMP3P08254 477 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 MYBP10242 640 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 XRCC5P13010 732 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 CYBAP13498 195 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 GUCY2CP25092 1073 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 NMT1P30419 496 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 HOXD13P35453 343 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 ZNF131P52739 623 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 PSMD2Q13200 908 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 TARBP2Q15633 366 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 HSP90AA4PQ58FG1 418 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 FAM160B1Q5W0V3 765 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 KSR1Q8IVT5 923 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 ENOX1Q8TC92 643 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 TRAPPC12Q8WVT3 735 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 BSNDQ8WZ55 320 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 GLG1Q92896 1179 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 CCDC47Q96A33 483 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 ZBTB10Q96DT7 871 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 NECAB3Q96P71 396 aaPredicted RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 DUSP9Q99956 384 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 C16orf70Q9BSU1 422 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 NIFKQ9BYG3 293 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 NAT10Q9H0A0 1025 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 RNPEPQ9H4A4 650 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 CYP26B1Q9NR63 512 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 SAMSN1Q9NSI8 373 aaKnown RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 FANCLQ9NW38 375 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 PRKAG2Q9UGJ0 569 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 FARP1Q9Y4F1 1045 aaPredicted RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 KAT6AQ92794 2004 aa10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 TRIP12Q14669 1992 aaPredicted RBP10.15□□□□□ -0.78
RTN4IP1-204ENST00000539449 FRMPD3Q5JV73 1810 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 EMSYQ7Z589 1322 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 MYO9BQ13459 2157 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 MYADML2A6NDP7 307 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 BECN2A8MW95 431 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 RBAK-RBAKDNI3L0D1 243 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 IKBKBO14920 756 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 DKC1O60832 514 aaKnown RBP eCLIP10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 TBCAO75347 108 aaKnown RBP10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 PRPF6O94906 941 aaKnown RBP10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 CAVIN2O95810 425 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 ZNF286BP0CG31 522 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 HOXD8P13378 290 aaPredicted RBP10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 ATP1A3P13637 1013 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 CCNE1P24864 410 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 ERCC5P28715 1186 aaPredicted RBP10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 CCND3P30281 292 aaPredicted RBP10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 BEX3Q00994 111 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 MYL5Q02045 173 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 CACNB2Q08289 660 aaPredicted RBP10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 KCNA1Q09470 495 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 ZC2HC1CQ53FD0 456 aaPredicted RBP10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 COBLL1Q53SF7 1204 aa10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 L1TD1Q5T7N2 865 aaKnown RBP10.14□□□□□ -0.79
RTN4IP1-204ENST00000539449 ANKRD40Q6AI12 368 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms