RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PLAGL2Q9UPG8 496 aa21.4■■□□□ 1.02
TNFRSF1A-212ENST00000539372 BTBD18B2RXH4 712 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 TBX3O15119 743 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CSDE1O75534 798 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 MMP1P03956 469 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 QARSP47897 775 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 TRIM29Q14134 588 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 SPOUT1Q5T280 376 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 NCAPH2Q6IBW4 605 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 FAM43BQ6ZT52 329 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ZNF710Q8N1W2 664 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 KLHL23Q8NBE8 558 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ATP6V0A4Q9HBG4 840 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 WRAP73Q9P2S5 460 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 HCSTQ9UBK5 93 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 BRWD1Q9NSI6 2320 aa21.39■■□□□ 1.01
TNFRSF1A-212ENST00000539372 IGKV6-21A0A0C4DH24 114 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ITGB1P05556 798 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 P4HBP07237 508 aaKnown RBP21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ZSCAN20P17040 1043 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 DNM2P50570 870 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 NPEPPSP55786 919 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 FAM189BP81408 668 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 LEXMQ3ZCV2 418 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 DIS3L2Q8IYB7 885 aaKnown RBP21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ZNF579Q8NAF0 562 aaKnown RBP21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CYP26B1Q9NR63 512 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 RNF216Q9NWF9 866 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 TMEM161AQ9NX61 479 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 RGL1Q9NZL6 768 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 SUCLA2Q9P2R7 463 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 LIMCH1Q9UPQ0 1083 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 KIAA1671Q9BY89 1806 aa21.38■■□□□ 1.01
TNFRSF1A-212ENST00000539372 H3BQ06 376 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 MAFO75444 373 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 BAG4O95429 457 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 DNAJB1P25685 340 aa21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CAMK1Q14012 370 aa21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 EPHA7Q15375 998 aa21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 RHPN2Q8IUC4 686 aa21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CCDC83Q8IWF9 413 aa21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 SLFN12Q8IYM2 578 aa21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 SPPL3Q8TCT6 385 aa21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 P2RX5Q93086 422 aa21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 LXNQ9BS40 222 aa21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 GCOM2Q9BZD3 368 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1A-212ENST00000539372 MYO7AQ13402 2215 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ATG2AQ2TAZ0 1938 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 A0A087WZ62 844 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 WNT7AO00755 349 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 GUCY1B3Q02153 619 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 SPIRE1Q08AE8 756 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CTTNQ14247 550 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 C8orf34Q49A92 452 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 NAALADL2Q58DX5 795 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 KSR1Q8IVT5 923 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 RNF169Q8NCN4 708 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 PABPC5Q96DU9 382 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 DYDC2Q96IM9 177 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CEP170P1Q96L14 293 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 FDXACB1Q9BRP7 624 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ELAC1Q9H777 363 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 TYW1Q9NV66 732 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CLDND1Q9NY35 253 aa21.36■■□□□ 1.01
TNFRSF1A-212ENST00000539372 DKC1O60832 514 aaKnown RBP eCLIP21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 GTF2F1P35269 517 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■■■■□ 22.9
TNFRSF1A-212ENST00000539372 CDC42EP1Q00587 391 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CYP4A11Q02928 519 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 HYAL1Q12794 435 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CALCRLQ16602 461 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ECHDC2Q86YB7 292 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 NEK9Q8TD19 979 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 POF1BQ8WVV4 589 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 NLRP4Q96MN2 994 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 IGFLR1Q9H665 355 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 BMP2KQ9NSY1 1161 aaPredicted RBP21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 RNF19AQ9NV58 838 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 PCDHB12Q9Y5F1 795 aa21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 FNDC1Q4ZHG4 1894 aaPredicted RBP21.35■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ZBTB39O15060 712 aa21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 YWHABP31946 246 aaKnown RBP21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 IRS1P35568 1242 aa21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 POLGP54098 1239 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 COL19A1Q14993 1142 aa21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 PTCRAQ6ISU1 281 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 SLC7A3Q8WY07 619 aa21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 TMEM143Q96AN5 459 aa21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 CASD1Q96PB1 797 aa21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 KIF2CQ99661 725 aa21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 JPH2Q9BR39 696 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 AAASQ9NRG9 546 aa21.34■■□□□ 1.01
TNFRSF1A-212ENST00000539372 NEMFO60524 1076 aa21.33■■□□□ 1.01
TNFRSF1A-212ENST00000539372 IL9P15248 144 aa21.33■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ATP2B1P20020 1258 aa21.33■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ADGRD2Q7Z7M1 963 aa21.33■■□□□ 1.01
TNFRSF1A-212ENST00000539372 ZNF410Q86VK4 478 aa21.33■■□□□ 1.01
TNFRSF1A-212ENST00000539372 TPH2Q8IWU9 490 aa21.33■■□□□ 1.01
TNFRSF1A-212ENST00000539372 C4orf19Q8IY42 314 aa21.33■■□□□ 1.01
TNFRSF1A-212ENST00000539372 COLGALT1Q8NBJ5 622 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms