RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ELAC1Q9H777 363 aaKnown RBP24.94■■□□□ 1.58
SCARB1-206ENST00000539320 H3BQ06 376 aaPredicted RBP24.93■■□□□ 1.58
SCARB1-206ENST00000539320 TBX3O15119 743 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 NCK2O43639 380 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 NEK4P51957 841 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 FAM189BP81408 668 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 DRP2Q13474 957 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 EARS2Q5JPH6 523 aaKnown RBP24.93■■□□□ 1.58
SCARB1-206ENST00000539320 FAM102BQ5T8I3 360 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 EP400NLQ6ZTU2 488 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 POTEDQ86YR6 584 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 KLHL23Q8NBE8 558 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.93■■□□□ 1.58
SCARB1-206ENST00000539320 CLDND1Q9NY35 253 aa24.93■■□□□ 1.58
SCARB1-206ENST00000539320 IGKV6-21A0A0C4DH24 114 aa24.92■■□□□ 1.58
SCARB1-206ENST00000539320 FAM205CA6NFA0 338 aa24.92■■□□□ 1.58
SCARB1-206ENST00000539320 DDX11L8A8MPP1 907 aa24.92■■□□□ 1.58
SCARB1-206ENST00000539320 DKC1O60832 514 aaKnown RBP eCLIP24.92■■□□□ 1.581e-7■■■■□ 19.3
SCARB1-206ENST00000539320 FGFR1P11362 822 aa24.92■■□□□ 1.58
SCARB1-206ENST00000539320 ZSCAN20P17040 1043 aaPredicted RBP24.92■■□□□ 1.58
SCARB1-206ENST00000539320 NR5A1Q13285 461 aa24.92■■□□□ 1.58
SCARB1-206ENST00000539320 SPOUT1Q5T280 376 aaKnown RBP24.92■■□□□ 1.58
SCARB1-206ENST00000539320 PTCRAQ6ISU1 281 aaPredicted RBP24.92■■□□□ 1.58
SCARB1-206ENST00000539320 SPPL3Q8TCT6 385 aa24.92■■□□□ 1.58
SCARB1-206ENST00000539320 SH2D3AQ9BRG2 576 aa24.92■■□□□ 1.58
SCARB1-206ENST00000539320 HOXA2O43364 376 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 MARCH6O60337 910 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 QARSP47897 775 aaKnown RBP24.91■■□□□ 1.58
SCARB1-206ENST00000539320 DNM2P50570 870 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 HYAL1Q12794 435 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 CAMK1Q14012 370 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 PUS10Q3MIT2 529 aaKnown RBP24.91■■□□□ 1.58
SCARB1-206ENST00000539320 PLA2G4FQ68DD2 849 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 ANO5Q75V66 913 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 HAS1Q92839 578 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 TNFRSF25Q93038 417 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 JPH2Q9BR39 696 aaPredicted RBP24.91■■□□□ 1.58
SCARB1-206ENST00000539320 AAASQ9NRG9 546 aa24.91■■□□□ 1.58
SCARB1-206ENST00000539320 JAK2O60674 1132 aa24.9■■□□□ 1.58
SCARB1-206ENST00000539320 MAFO75444 373 aaPredicted RBP24.9■■□□□ 1.58
SCARB1-206ENST00000539320 IL9P15248 144 aa24.9■■□□□ 1.58
SCARB1-206ENST00000539320 DNAJB1P25685 340 aa24.9■■□□□ 1.58
SCARB1-206ENST00000539320 CDC42EP1Q00587 391 aa24.9■■□□□ 1.58
SCARB1-206ENST00000539320 POF1BQ8WVV4 589 aa24.9■■□□□ 1.58
SCARB1-206ENST00000539320 PPP2R3CQ969Q6 453 aa24.9■■□□□ 1.58
SCARB1-206ENST00000539320 GCOM2Q9BZD3 368 aaPredicted RBP24.9■■□□□ 1.58
SCARB1-206ENST00000539320 TMEM117Q9H0C3 514 aa24.9■■□□□ 1.58
SCARB1-206ENST00000539320 HCSTQ9UBK5 93 aa24.9■■□□□ 1.58
SCARB1-206ENST00000539320 PCDHB12Q9Y5F1 795 aa24.9■■□□□ 1.58
SCARB1-206ENST00000539320 SEC24BO95487 1268 aa24.89■■□□□ 1.58
SCARB1-206ENST00000539320 P4HBP07237 508 aaKnown RBP24.89■■□□□ 1.58
SCARB1-206ENST00000539320 FGFR4P22455 802 aa24.89■■□□□ 1.58
SCARB1-206ENST00000539320 ZNF410Q86VK4 478 aa24.89■■□□□ 1.58
SCARB1-206ENST00000539320 ECHDC2Q86YB7 292 aa24.89■■□□□ 1.58
SCARB1-206ENST00000539320 LXNQ9BS40 222 aa24.89■■□□□ 1.58
SCARB1-206ENST00000539320 CYP26B1Q9NR63 512 aa24.89■■□□□ 1.58
SCARB1-206ENST00000539320 RNF19AQ9NV58 838 aa24.89■■□□□ 1.58
SCARB1-206ENST00000539320 SUCLA2Q9P2R7 463 aaPredicted RBP24.89■■□□□ 1.58
SCARB1-206ENST00000539320 GRXCR2A6NFK2 248 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 LAG3P18627 525 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 IRS1P35568 1242 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 FOSBP53539 338 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 ST3GAL1Q11201 340 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 TRIM29Q14134 588 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 EPHA7Q15375 998 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 CTC1Q2NKJ3 1217 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 NCAPH2Q6IBW4 605 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 SLFN12Q8IYM2 578 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 COLGALT1Q8NBJ5 622 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 TYW1Q9NV66 732 aaKnown RBP24.88■■□□□ 1.57
SCARB1-206ENST00000539320 WRAP73Q9P2S5 460 aaPredicted RBP24.88■■□□□ 1.57
SCARB1-206ENST00000539320 PPME1Q9Y570 386 aa24.88■■□□□ 1.57
SCARB1-206ENST00000539320 PLXNA4Q9HCM2 1894 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 A0A087WZ62 844 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 BAG4O95429 457 aaKnown RBP24.87■■□□□ 1.57
SCARB1-206ENST00000539320 SFPQP23246 707 aaKnown RBP eCLIP24.87■■□□□ 1.572e-6■■□□□ 12.9
SCARB1-206ENST00000539320 NPEPPSP55786 919 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 UBE3AQ05086 875 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 SPIRE1Q08AE8 756 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 CSPP1Q1MSJ5 1256 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 RHPN2Q8IUC4 686 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 FAM178BQ8IXR5 827 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 DIS3L2Q8IYB7 885 aaKnown RBP24.87■■□□□ 1.57
SCARB1-206ENST00000539320 THNSL1Q8IYQ7 743 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 ABI1Q8IZP0 508 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 LRRC43Q8N309 656 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 FDXACB1Q9BRP7 624 aaPredicted RBP24.87■■□□□ 1.57
SCARB1-206ENST00000539320 DACT1Q9NYF0 836 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 FAM50BQ9Y247 325 aa24.87■■□□□ 1.57
SCARB1-206ENST00000539320 CSDE1O75534 798 aaKnown RBP24.86■■□□□ 1.57
SCARB1-206ENST00000539320 GTF2F1P35269 517 aaKnown RBP eCLIP24.86■■□□□ 1.576e-7■■■■□ 21.5
SCARB1-206ENST00000539320 LTBRP36941 435 aa24.86■■□□□ 1.57
SCARB1-206ENST00000539320 C4orf19Q8IY42 314 aa24.86■■□□□ 1.57
SCARB1-206ENST00000539320 RNF169Q8NCN4 708 aa24.86■■□□□ 1.57
SCARB1-206ENST00000539320 SLC7A3Q8WY07 619 aa24.86■■□□□ 1.57
SCARB1-206ENST00000539320 CEP170P1Q96L14 293 aa24.86■■□□□ 1.57
SCARB1-206ENST00000539320 NLRP4Q96MN2 994 aa24.86■■□□□ 1.57
SCARB1-206ENST00000539320 CASD1Q96PB1 797 aa24.86■■□□□ 1.57
SCARB1-206ENST00000539320 INO80BQ9C086 356 aaPredicted RBP24.86■■□□□ 1.57
SCARB1-206ENST00000539320 IGFLR1Q9H665 355 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms