RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 DCDC2CA8MYV0 355 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 ATP4AP20648 1035 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 NPEPPSP55786 919 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 IGBP1P78318 339 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 NCBP1Q09161 790 aaKnown RBP11.32□□□□□ -0.6
CLPB-210ENST00000539148 STIM1Q13586 685 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 ECM1Q16610 540 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 FAM102BQ5T8I3 360 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 C1orf53Q5VUE5 145 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 PLA2G4FQ68DD2 849 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 EFCAB12Q6NXP0 572 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 MTHFD1LQ6UB35 978 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
CLPB-210ENST00000539148 C2orf40Q9H1Z8 148 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 ZHX3Q9H4I2 956 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 C11orf49Q9H6J7 331 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 SUGCTQ9HAC7 445 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 PARVGQ9HBI0 331 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 SETD4Q9NVD3 440 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 PANK4Q9NVE7 773 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 WRAP73Q9P2S5 460 aaPredicted RBP11.32□□□□□ -0.6
CLPB-210ENST00000539148 HDAC6Q9UBN7 1215 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 DACH1Q9UI36 760 aa11.32□□□□□ -0.6
CLPB-210ENST00000539148 A0A087X0B3 334 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 MBLAC1A4D2B0 266 aaPredicted RBP11.31□□□□□ -0.6
CLPB-210ENST00000539148 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 STBD1O95210 358 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 PARNO95453 639 aaKnown RBP11.31□□□□□ -0.6
CLPB-210ENST00000539148 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
CLPB-210ENST00000539148 CYP2C9P11712 490 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 NAMPTP43490 491 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 EFNA5P52803 228 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 POU5F1BQ06416 359 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 PTK7Q13308 1070 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 BFSP2Q13515 415 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 KCNB1Q14721 858 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLPB-210ENST00000539148 PTGISQ16647 500 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 UNC13DQ70J99 1090 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 KCNK18Q7Z418 384 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 ZBTB8OSQ8IWT0 167 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 MYCT1Q8N699 235 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 FAM200AQ8TCP9 573 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 LMBR1Q8WVP7 490 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 SCLT1Q96NL6 688 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 TOX2Q96NM4 488 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 AKT3Q9Y243 479 aa11.31□□□□□ -0.6
CLPB-210ENST00000539148 IGKV6-21A0A0C4DH24 114 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 HIP1RO75146 1068 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 C22orf31O95567 290 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 RPN1P04843 607 aaKnown RBP11.3□□□□□ -0.6
CLPB-210ENST00000539148 PLS3P13797 630 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 HOXC8P31273 242 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 PHKA2P46019 1235 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 GIT2Q14161 759 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 HERC4Q5GLZ8 1057 aaPredicted RBP11.3□□□□□ -0.6
CLPB-210ENST00000539148 DYMQ7RTS9 669 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 ZNF410Q86VK4 478 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 FAM178BQ8IXR5 827 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 SLC43A3Q8NBI5 491 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 DEPTORQ8TB45 409 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 CAGE1Q8TC20 777 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 HVCN1Q96D96 273 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 FUCA2Q9BTY2 467 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 HTATIP2Q9BUP3 242 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 OLFML3Q9NRN5 406 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 ANO10Q9NW15 660 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 KIAA1468Q9P260 1216 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 SUCLA2Q9P2R7 463 aaPredicted RBP11.3□□□□□ -0.6
CLPB-210ENST00000539148 PCDHB13Q9Y5F0 798 aa11.3□□□□□ -0.6
CLPB-210ENST00000539148 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.29□□□□□ -0.6
CLPB-210ENST00000539148 MYMKA6NI61 221 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 ZBTB39O15060 712 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 RHOBTB3O94955 611 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 PTGS1P23219 599 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 ZNF131P52739 623 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 DPYDQ12882 1025 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 STRN3Q13033 797 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 CAMK4Q16566 473 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 STX1AQ16623 288 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 CT47A1Q5JQC4 288 aaPredicted RBP11.29□□□□□ -0.6
CLPB-210ENST00000539148 NT5DC1Q5TFE4 455 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 SLC39A5Q6ZMH5 540 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 APBB1IPQ7Z5R6 666 aaPredicted RBP11.29□□□□□ -0.6
CLPB-210ENST00000539148 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 SERINC5Q86VE9 423 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 USP38Q8NB14 1042 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 SPIRE2Q8WWL2 714 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 NTPCRQ9BSD7 190 aaKnown RBP11.29□□□□□ -0.6
CLPB-210ENST00000539148 RUSC1Q9BVN2 902 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 GCOM2Q9BZD3 368 aaPredicted RBP11.29□□□□□ -0.6
CLPB-210ENST00000539148 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
CLPB-210ENST00000539148 MRPL44Q9H9J2 332 aaKnown RBP11.29□□□□□ -0.6
CLPB-210ENST00000539148 KMT5AQ9NQR1 393 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 PDLIM7Q9NR12 457 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 PRKAG2Q9UGJ0 569 aa11.29□□□□□ -0.6
CLPB-210ENST00000539148 EXOC7Q9UPT5 735 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms