RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PPFIA1Q13136 1202 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 IQCB1Q15051 598 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 TARBP2Q15633 366 aaKnown RBP17.01■□□□□ 0.31
VAMP1-207ENST00000539047 SPATA1Q5VX52 437 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 DHX40Q8IX18 779 aaKnown RBP17.01■□□□□ 0.31
VAMP1-207ENST00000539047 ANKRD20A12PQ8NF67 263 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 NOC3LQ8WTT2 800 aaKnown RBP17.01■□□□□ 0.31
VAMP1-207ENST00000539047 P2RX5Q93086 422 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 HPS3Q969F9 1004 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 HVCN1Q96D96 273 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 C16orf70Q9BSU1 422 aa17.01■□□□□ 0.31
VAMP1-207ENST00000539047 HMX1Q9NP08 348 aaPredicted RBP17.01■□□□□ 0.31
VAMP1-207ENST00000539047 DDX20Q9UHI6 824 aaKnown RBP17.01■□□□□ 0.31
VAMP1-207ENST00000539047 RRN3P2A6NIE6 340 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 CCDC169A6NNP5 214 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 MAFO75444 373 aaPredicted RBP17■□□□□ 0.31
VAMP1-207ENST00000539047 PTGS1P23219 599 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 TMOD1P28289 359 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 CCND3P30281 292 aaPredicted RBP17■□□□□ 0.31
VAMP1-207ENST00000539047 CHMP4BP1P59074 171 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 CAP1Q01518 475 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 LRRC63Q05C16 580 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 TRIM32Q13049 653 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 MAPK7Q13164 816 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 MFSD10Q14728 455 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 GNASQ5JWF2 1037 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 MAP3K21Q5TCX8 1036 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 IER5Q5VY09 327 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 FAM114A1Q8IWE2 563 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 PCSK9Q8NBP7 692 aaKnown RBP17■□□□□ 0.31
VAMP1-207ENST00000539047 PSPC1Q8WXF1 523 aaKnown RBP17■□□□□ 0.31
VAMP1-207ENST00000539047 KMT5AQ9NQR1 393 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 NFE2L3Q9Y4A8 694 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 PTCH2Q9Y6C5 1203 aa17■□□□□ 0.31
VAMP1-207ENST00000539047 PHLPP2Q6ZVD8 1323 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 SIP14410 1827 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 SFI1A8K8P3 1242 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 CALUO43852 315 aaPredicted RBP16.99■□□□□ 0.31
VAMP1-207ENST00000539047 SLC34A2O95436 690 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 INSRRP14616 1297 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 PSEN2P49810 448 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 PEX3P56589 373 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 STX17P56962 302 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 IGBP1P78318 339 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 BEX3Q00994 111 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 SPAG1Q07617 926 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 TFDP1Q14186 410 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 MXD4Q14582 209 aaPredicted RBP16.99■□□□□ 0.31
VAMP1-207ENST00000539047 RNF180Q86T96 592 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 SPIRE2Q8WWL2 714 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 MTG1Q9BT17 334 aaPredicted RBP16.99■□□□□ 0.31
VAMP1-207ENST00000539047 RNPEPQ9H4A4 650 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 MAGEC2Q9UBF1 373 aaPredicted RBP16.99■□□□□ 0.31
VAMP1-207ENST00000539047 EXOC7Q9UPT5 735 aa16.99■□□□□ 0.31
VAMP1-207ENST00000539047 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
VAMP1-207ENST00000539047 TPM2P07951 284 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 GNAT1P11488 350 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 CDK11BP21127 795 aaKnown RBP16.98■□□□□ 0.31
VAMP1-207ENST00000539047 NAMPTP43490 491 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 LRRC41Q15345 812 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 GRIK4Q16099 956 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 BMT2Q1RMZ1 405 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 KIAA0753Q2KHM9 967 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 FOXR2Q6PJQ5 311 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 HS2ST1Q7LGA3 356 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 NELFCDQ8IXH7 590 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 SYCP3Q8IZU3 236 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 DAW1Q8N136 415 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 METTL13Q8N6R0 699 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 DEPTORQ8TB45 409 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 GOLGA5Q8TBA6 731 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 MAP7D2Q96T17 732 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 TMEM206Q9H813 350 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 SUGCTQ9HAC7 445 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 GPRC5CQ9NQ84 441 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 XPNPEP1Q9NQW7 623 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 PDLIM7Q9NR12 457 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 PTPN22Q9Y2R2 807 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 PCDHA2Q9Y5H9 948 aa16.98■□□□□ 0.31
VAMP1-207ENST00000539047 EVPLQ92817 2033 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 NRCAMQ92823 1304 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 LRRIQ4A6NIV6 560 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 PGK1P00558 417 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 TPM3P06753 285 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 MYBP10242 640 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 CST5P28325 142 aaPredicted RBP16.97■□□□□ 0.31
VAMP1-207ENST00000539047 NMT1P30419 496 aaKnown RBP16.97■□□□□ 0.31
VAMP1-207ENST00000539047 NCKAP1LP55160 1127 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 NKX3-2P78367 333 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 PURAQ00577 322 aaKnown RBP16.97■□□□□ 0.31
VAMP1-207ENST00000539047 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
VAMP1-207ENST00000539047 SLC9C1Q4G0N8 1177 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 EPM2AIP1Q7L775 607 aaPredicted RBP16.97■□□□□ 0.31
VAMP1-207ENST00000539047 ZNF720Q7Z2F6 126 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 ZBTB8OSQ8IWT0 167 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 CSGALNACT2Q8N6G5 542 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 C7orf31Q8N865 590 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 SCFD1Q8WVM8 642 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 TMEM143Q96AN5 459 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms