RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 C9IYK1 514 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 GAS2O43903 313 aaKnown RBP12.95□□□□□ -0.34
RTN3-209ENST00000538995 MGEA5O60502 916 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 LYPLA2O95372 231 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 CTNNB1P35222 781 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 BMPR1AP36894 532 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 RFC5P40937 340 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 FOSBP53539 338 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 DSC3Q14574 896 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 SKIV2LQ15477 1246 aaKnown RBP12.95□□□□□ -0.34
RTN3-209ENST00000538995 NCAPH2Q6IBW4 605 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 ZNF410Q86VK4 478 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 FAM184AQ8NB25 1140 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 FBXO18Q8NFZ0 1043 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 SLC7A3Q8WY07 619 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 SCLT1Q96NL6 688 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 ASB2Q96Q27 587 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 LMAN2LQ9H0V9 348 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 ELAC1Q9H777 363 aaKnown RBP12.95□□□□□ -0.34
RTN3-209ENST00000538995 LRFN2Q9ULH4 789 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 PCDHA12Q9UN75 941 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 PCDHB7Q9Y5E2 793 aa12.95□□□□□ -0.34
RTN3-209ENST00000538995 TMEM150BA6NC51 233 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 YWHABP31946 246 aaKnown RBP12.94□□□□□ -0.34
RTN3-209ENST00000538995 TRAPPC10P48553 1259 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 FAM189BP81408 668 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 GPM6BQ13491 265 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 PLA2G4FQ68DD2 849 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 POTEHQ6S545 545 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 OTUD6AQ7L8S5 288 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 NLRP7Q8WX94 980 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 CEP170P1Q96L14 293 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 MTMR9Q96QG7 549 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 GCOM2Q9BZD3 368 aaPredicted RBP12.94□□□□□ -0.34
RTN3-209ENST00000538995 INO80BQ9C086 356 aaPredicted RBP12.94□□□□□ -0.34
RTN3-209ENST00000538995 DHX33Q9H6R0 707 aaKnown RBP12.94□□□□□ -0.34
RTN3-209ENST00000538995 TMEM161AQ9NX61 479 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 WRAP73Q9P2S5 460 aaPredicted RBP12.94□□□□□ -0.34
RTN3-209ENST00000538995 XIRP2A4UGR9 3374 aa12.94□□□□□ -0.34
RTN3-209ENST00000538995 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 WNT7AO00755 349 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 HOXA2O43364 376 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 ZSCAN20P17040 1043 aaPredicted RBP12.93□□□□□ -0.34
RTN3-209ENST00000538995 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.34
RTN3-209ENST00000538995 MCM2P49736 904 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
RTN3-209ENST00000538995 GUCY1B3Q02153 619 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 DRP2Q13474 957 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 NOSTRINQ8IVI9 506 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 RSPH1Q8WYR4 309 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 P2RX5Q93086 422 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 HLA-CQ95604 372 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 DYDC2Q96IM9 177 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 HSD17B14Q9BPX1 270 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
RTN3-209ENST00000538995 TTC12Q9H892 705 aaPredicted RBP12.93□□□□□ -0.34
RTN3-209ENST00000538995 ATP6V0A4Q9HBG4 840 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 CHST12Q9NRB3 414 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 RGL1Q9NZL6 768 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 SUCLA2Q9P2R7 463 aaPredicted RBP12.93□□□□□ -0.34
RTN3-209ENST00000538995 MRPL42Q9Y6G3 142 aaKnown RBP12.93□□□□□ -0.34
RTN3-209ENST00000538995 REV3LO60673 3130 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 WDR81Q562E7 1941 aa12.93□□□□□ -0.34
RTN3-209ENST00000538995 SLITRK3O94933 977 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 MCM7P33993 719 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 NPEPPSP55786 919 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 CYP4A11Q02928 519 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 GNL2Q13823 731 aaKnown RBP12.92□□□□□ -0.34
RTN3-209ENST00000538995 TCP11Q8WWU5 503 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
RTN3-209ENST00000538995 EVPLQ92817 2033 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 SH2D3AQ9BRG2 576 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 TRAIPQ9BWF2 469 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 ANKEF1Q9NU02 776 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 DACT1Q9NYF0 836 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 COL4A3BPQ9Y5P4 624 aa12.92□□□□□ -0.34
RTN3-209ENST00000538995 A0A087WZ62 844 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 A0A0U1RQF3 1178 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 OR52Z1P0C646 297 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.349e-6■□□□□ 9.5
RTN3-209ENST00000538995 TXKP42681 527 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 CTTNQ14247 550 aaKnown RBP12.91□□□□□ -0.34
RTN3-209ENST00000538995 EMC2Q15006 297 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 PAN2Q504Q3 1202 aaKnown RBP12.91□□□□□ -0.34
RTN3-209ENST00000538995 XKR9Q5GH70 373 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 RHPN2Q8IUC4 686 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 TPH2Q8IWU9 490 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 FDXACB1Q9BRP7 624 aaPredicted RBP12.91□□□□□ -0.34
RTN3-209ENST00000538995 TMEM117Q9H0C3 514 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 TMEM60Q9H2L4 133 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 NSUN3Q9H649 340 aaKnown RBP12.91□□□□□ -0.34
RTN3-209ENST00000538995 AAASQ9NRG9 546 aa12.91□□□□□ -0.34
RTN3-209ENST00000538995 NOL7Q9UMY1 257 aaKnown RBP12.91□□□□□ -0.34
RTN3-209ENST00000538995 TBKBP1A7MCY6 615 aa12.9□□□□□ -0.34
RTN3-209ENST00000538995 ASAP2O43150 1006 aa12.9□□□□□ -0.34
RTN3-209ENST00000538995 DGAT1O75907 488 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms