RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 STAG3L1P0CL83 205 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 CD52P31358 61 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 IRS1P35568 1242 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 IGBP1P78318 339 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 MRPS6P82932 125 aaKnown RBP10.17□□□□□ -0.78
MRE11-208ENST00000538923 SMAD4Q13485 552 aaKnown RBP10.17□□□□□ -0.78
MRE11-208ENST00000538923 CLUL1Q15846 466 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 HERC4Q5GLZ8 1057 aaPredicted RBP10.17□□□□□ -0.78
MRE11-208ENST00000538923 NPAS4Q8IUM7 802 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 SRBD1Q8N5C6 995 aaKnown RBP10.17□□□□□ -0.78
MRE11-208ENST00000538923 TMEM87BQ96K49 555 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 MFSD14AQ96MC6 490 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 KLF16Q9BXK1 252 aaPredicted RBP10.17□□□□□ -0.78
MRE11-208ENST00000538923 FAM49AQ9H0Q0 323 aaPredicted RBP10.17□□□□□ -0.78
MRE11-208ENST00000538923 IGFLR1Q9H665 355 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 AGO3Q9H9G7 860 aaKnown RBP10.17□□□□□ -0.78
MRE11-208ENST00000538923 JPH1Q9HDC5 661 aaPredicted RBP10.17□□□□□ -0.78
MRE11-208ENST00000538923 ALG13Q9NP73 1137 aaKnown RBP10.17□□□□□ -0.78
MRE11-208ENST00000538923 JADE2Q9NQC1 790 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 CD207Q9UJ71 328 aa10.17□□□□□ -0.78
MRE11-208ENST00000538923 TRIP12Q14669 1992 aaPredicted RBP10.16□□□□□ -0.78
MRE11-208ENST00000538923 STXBP3O00186 592 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 TBX10O75333 385 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 PLEKHA8P1O95397 391 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 INSRRP14616 1297 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 MCM5P33992 734 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 NDUFV1P49821 464 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 DLX2Q07687 328 aaPredicted RBP10.16□□□□□ -0.78
MRE11-208ENST00000538923 ADAM15Q13444 863 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 UBE2SQ16763 222 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 FAM43BQ6ZT52 329 aaPredicted RBP10.16□□□□□ -0.78
MRE11-208ENST00000538923 LINC01599Q8WXQ3 324 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 SLC9A2Q9UBY0 812 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 PCDHA6Q9UN73 950 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 PCDHA8Q9Y5H6 950 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 PCDHA2Q9Y5H9 948 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 TRPV2Q9Y5S1 764 aa10.16□□□□□ -0.78
MRE11-208ENST00000538923 RBM8AQ9Y5S9 174 aaKnown RBP10.16□□□□□ -0.78
MRE11-208ENST00000538923 MRPL42Q9Y6G3 142 aaKnown RBP10.16□□□□□ -0.78
MRE11-208ENST00000538923 IGSF9BQ9UPX0 1349 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 SH2B2O14492 632 aaPredicted RBP10.15□□□□□ -0.78
MRE11-208ENST00000538923 LCE2BO14633 110 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 LINC01565O15544 149 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 CSPG5O95196 566 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 ITGB1P05556 798 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 SCG2P13521 617 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 GTF2F1P35269 517 aaKnown RBP eCLIP10.15□□□□□ -0.78
MRE11-208ENST00000538923 LIFRP42702 1097 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 MRE11P49959 708 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 SLC26A2P50443 739 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 NHLH1Q02575 133 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 PAK2Q13177 524 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 CAMK1Q14012 370 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 HFE2Q6ZVN8 426 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 PLPPR4Q7Z2D5 763 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 HEATR3Q7Z4Q2 680 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 RNF135Q8IUD6 432 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 TEX2Q8IWB9 1127 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 CMTR1Q8N1G2 835 aaKnown RBP10.15□□□□□ -0.78
MRE11-208ENST00000538923 NME8Q8N427 588 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 EFHBQ8N7U6 833 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 KLHL23Q8NBE8 558 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 SPPL3Q8TCT6 385 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 ZBTB10Q96DT7 871 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 MSLNLQ96KJ4 702 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 FBXL18Q96ME1 805 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 SDF4Q9BRK5 362 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 CELF4Q9BZC1 486 aaKnown RBP10.15□□□□□ -0.78
MRE11-208ENST00000538923 ZMYND15Q9H091 742 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 TMPRSS4Q9NRS4 437 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 KCNH7Q9NS40 1196 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 MUTYHQ9UIF7 546 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 PADI3Q9ULW8 664 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 SLC12A7Q9Y666 1083 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 MICAL3Q7RTP6 2002 aa10.15□□□□□ -0.78
MRE11-208ENST00000538923 NFASCO94856 1347 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 KDM3AQ9Y4C1 1321 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 SMIM35A0A1B0GVV1 85 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 FSD2A1L4K1 749 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 TRAK2O60296 914 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 EYA4O95677 639 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 DNAJB1P25685 340 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 STAT5BP51692 787 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 ACTR2P61160 394 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 KRT76Q01546 638 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 TMEM62Q0P6H9 643 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 COASYQ13057 564 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 PAN2Q504Q3 1202 aaKnown RBP10.14□□□□□ -0.79
MRE11-208ENST00000538923 TMTC3Q6ZXV5 915 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 RTN4RL1Q86UN2 441 aaPredicted RBP10.14□□□□□ -0.79
MRE11-208ENST00000538923 CCDC82Q8N4S0 544 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 FANCBQ8NB91 859 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 SMRP1Q8NCR6 262 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 POF1BQ8WVV4 589 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 EDAQ92838 391 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 PCYT2Q99447 389 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 MXRA8Q9BRK3 442 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 ALG2Q9H553 416 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 LRFN2Q9ULH4 789 aa10.14□□□□□ -0.79
MRE11-208ENST00000538923 PCDHB11Q9Y5F2 797 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms