RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 DIS3L2Q8IYB7 885 aaKnown RBP16.8■□□□□ 0.28
RAB40B-202ENST00000538809 NLRP7Q8WX94 980 aa16.8■□□□□ 0.28
RAB40B-202ENST00000538809 NAP1L4Q99733 375 aaKnown RBP16.8■□□□□ 0.28
RAB40B-202ENST00000538809 C1orf112Q9NSG2 853 aa16.8■□□□□ 0.28
RAB40B-202ENST00000538809 WRAP73Q9P2S5 460 aaPredicted RBP16.8■□□□□ 0.28
RAB40B-202ENST00000538809 HCSTQ9UBK5 93 aa16.8■□□□□ 0.28
RAB40B-202ENST00000538809 TBKBP1A7MCY6 615 aa16.79■□□□□ 0.28
RAB40B-202ENST00000538809 TBX3O15119 743 aa16.79■□□□□ 0.28
RAB40B-202ENST00000538809 CSDE1O75534 798 aaKnown RBP16.79■□□□□ 0.28
RAB40B-202ENST00000538809 RB1P06400 928 aa16.79■□□□□ 0.28
RAB40B-202ENST00000538809 FGFR1P11362 822 aa16.79■□□□□ 0.28
RAB40B-202ENST00000538809 GUCY1B3Q02153 619 aa16.79■□□□□ 0.28
RAB40B-202ENST00000538809 TRIM29Q14134 588 aa16.79■□□□□ 0.28
RAB40B-202ENST00000538809 FAM102BQ5T8I3 360 aa16.79■□□□□ 0.28
RAB40B-202ENST00000538809 SLC24A5Q71RS6 500 aa16.79■□□□□ 0.28
RAB40B-202ENST00000538809 LLPHQ9BRT6 129 aaKnown RBP16.79■□□□□ 0.28
RAB40B-202ENST00000538809 NSUN3Q9H649 340 aaKnown RBP16.79■□□□□ 0.28
RAB40B-202ENST00000538809 ALG13Q9NP73 1137 aaKnown RBP16.79■□□□□ 0.28
RAB40B-202ENST00000538809 DARSP14868 501 aaKnown RBP16.78■□□□□ 0.28
RAB40B-202ENST00000538809 KCNA5P22460 613 aa16.78■□□□□ 0.28
RAB40B-202ENST00000538809 EIF4BP23588 611 aaKnown RBP16.78■□□□□ 0.28
RAB40B-202ENST00000538809 QARSP47897 775 aaKnown RBP16.78■□□□□ 0.28
RAB40B-202ENST00000538809 NPEPPSP55786 919 aa16.78■□□□□ 0.28
RAB40B-202ENST00000538809 EP400NLQ6ZTU2 488 aa16.78■□□□□ 0.28
RAB40B-202ENST00000538809 ZSCAN31Q96LW9 406 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-202ENST00000538809 LXNQ9BS40 222 aa16.78■□□□□ 0.28
RAB40B-202ENST00000538809 SH2B1Q9NRF2 756 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-202ENST00000538809 BMP2KQ9NSY1 1161 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-202ENST00000538809 BDP1A6H8Y1 2624 aa16.78■□□□□ 0.28
RAB40B-202ENST00000538809 A0A087WZ62 844 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 IGKV6-21A0A0C4DH24 114 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 BAG4O95429 457 aaKnown RBP16.77■□□□□ 0.28
RAB40B-202ENST00000538809 ITGB1P05556 798 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 P4HBP07237 508 aaKnown RBP16.77■□□□□ 0.28
RAB40B-202ENST00000538809 CYP4A11Q02928 519 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 SPIRE1Q08AE8 756 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 SPOUT1Q5T280 376 aaKnown RBP16.77■□□□□ 0.28
RAB40B-202ENST00000538809 RHPN2Q8IUC4 686 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
RAB40B-202ENST00000538809 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 DYDC2Q96IM9 177 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 FDXACB1Q9BRP7 624 aaPredicted RBP16.77■□□□□ 0.28
RAB40B-202ENST00000538809 PLVAPQ9BX97 442 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 LMAN2LQ9H0V9 348 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 ATP6V0A4Q9HBG4 840 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 CYP26B1Q9NR63 512 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 TMEM161AQ9NX61 479 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 RGL1Q9NZL6 768 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 SUCLA2Q9P2R7 463 aaPredicted RBP16.77■□□□□ 0.28
RAB40B-202ENST00000538809 PLAGL2Q9UPG8 496 aa16.77■□□□□ 0.28
RAB40B-202ENST00000538809 TDRD15B5MCY1 1934 aaKnown RBP16.76■□□□□ 0.27
RAB40B-202ENST00000538809 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-202ENST00000538809 MAFO75444 373 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-202ENST00000538809 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-202ENST00000538809 DNAJB1P25685 340 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 DNM2P50570 870 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 CTTNQ14247 550 aaKnown RBP16.76■□□□□ 0.27
RAB40B-202ENST00000538809 RABEP1Q15276 862 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 EPHA7Q15375 998 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 CALCRLQ16602 461 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 KSR1Q8IVT5 923 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 SLFN12Q8IYM2 578 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 RNF169Q8NCN4 708 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 P2RX5Q93086 422 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 CEP170P1Q96L14 293 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 NLRP4Q96MN2 994 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 GCOM2Q9BZD3 368 aaPredicted RBP16.76■□□□□ 0.27
RAB40B-202ENST00000538809 RNF19AQ9NV58 838 aa16.76■□□□□ 0.27
RAB40B-202ENST00000538809 H3BQ06 376 aaPredicted RBP16.75■□□□□ 0.27
RAB40B-202ENST00000538809 NEMFO60524 1076 aa16.75■□□□□ 0.27
RAB40B-202ENST00000538809 DKC1O60832 514 aaKnown RBP eCLIP16.75■□□□□ 0.272e-8■■■■■ 48.7
RAB40B-202ENST00000538809 ATP2B1P20020 1258 aa16.75■□□□□ 0.27
RAB40B-202ENST00000538809 GTF2F1P35269 517 aaKnown RBP eCLIP16.75■□□□□ 0.27
RAB40B-202ENST00000538809 POLGP54098 1239 aaPredicted RBP16.75■□□□□ 0.27
RAB40B-202ENST00000538809 FAM189BP81408 668 aa16.75■□□□□ 0.27
RAB40B-202ENST00000538809 CAMK1Q14012 370 aa16.75■□□□□ 0.27
RAB40B-202ENST00000538809 ECHDC2Q86YB7 292 aa16.75■□□□□ 0.27
RAB40B-202ENST00000538809 ZNF710Q8N1W2 664 aa16.75■□□□□ 0.27
RAB40B-202ENST00000538809 C8orf76Q96K31 380 aa16.75■□□□□ 0.27
RAB40B-202ENST00000538809 ELAC1Q9H777 363 aaKnown RBP16.75■□□□□ 0.27
RAB40B-202ENST00000538809 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
RAB40B-202ENST00000538809 CLDND1Q9NY35 253 aa16.75■□□□□ 0.27
RAB40B-202ENST00000538809 ZBTB39O15060 712 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 YWHABP31946 246 aaKnown RBP16.74■□□□□ 0.27
RAB40B-202ENST00000538809 IRS1P35568 1242 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 HMGN5P82970 282 aaKnown RBP16.74■□□□□ 0.27
RAB40B-202ENST00000538809 HYAL1Q12794 435 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 FAM43BQ6ZT52 329 aaPredicted RBP16.74■□□□□ 0.27
RAB40B-202ENST00000538809 C4orf19Q8IY42 314 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 COLGALT1Q8NBJ5 622 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.74■□□□□ 0.27
RAB40B-202ENST00000538809 SPPL3Q8TCT6 385 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 POF1BQ8WVV4 589 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 SLC7A3Q8WY07 619 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 TMEM143Q96AN5 459 aa16.74■□□□□ 0.27
RAB40B-202ENST00000538809 PABPC5Q96DU9 382 aaKnown RBP16.74■□□□□ 0.27
RAB40B-202ENST00000538809 EIF2AK1Q9BQI3 630 aaKnown RBP16.74■□□□□ 0.27
RAB40B-202ENST00000538809 JPH2Q9BR39 696 aaPredicted RBP16.74■□□□□ 0.27
RAB40B-202ENST00000538809 CWH43Q9H720 699 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms