RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 PIK3R2O00459 728 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 SDHAP31040 664 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 SLC16A1P53985 500 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 SNRPNP63162 240 aaKnown RBP10.74□□□□□ -0.69
CD9-207ENST00000538418 PDCD2Q16342 344 aaPredicted RBP10.74□□□□□ -0.69
CD9-207ENST00000538418 GAB4Q2WGN9 574 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 TUBB8Q3ZCM7 444 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 CDKAL1Q5VV42 579 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 CCDC62Q6P9F0 684 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 NME9Q86XW9 330 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 SLC41A1Q8IVJ1 513 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 KRT78Q8N1N4 520 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.74□□□□□ -0.69
CD9-207ENST00000538418 UHMK1Q8TAS1 419 aaKnown RBP10.74□□□□□ -0.69
CD9-207ENST00000538418 WFDC12Q8WWY7 111 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 AUTS2Q8WXX7 1259 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 WDR12Q9GZL7 423 aaKnown RBP10.74□□□□□ -0.69
CD9-207ENST00000538418 NUP62CLQ9H1M0 184 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 NCOA1Q15788 1441 aa10.74□□□□□ -0.69
CD9-207ENST00000538418 ALDH2P05091 517 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 ELF2Q15723 593 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 MUM1Q2TAK8 710 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 CYP27C1Q4G0S4 372 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 PITRM1Q5JRX3 1037 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 MBNL2Q5VZF2 373 aaKnown RBP10.73□□□□□ -0.69
CD9-207ENST00000538418 HLA-DQA1Q5Y7H0 255 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 DPP9Q86TI2 863 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 STK11IPQ8N1F8 1099 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 GATA6Q92908 595 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 RIPOR3Q96MK2 946 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 LRFN3Q9BTN0 628 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 ARFGAP3Q9NP61 516 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 DUSP13Q9UII6 198 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 LRCH1Q9Y2L9 728 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 SAMD9LQ8IVG5 1584 aa10.73□□□□□ -0.69
CD9-207ENST00000538418 KRIT1O00522 736 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 LPLP06858 475 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 HTR1BP28222 390 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 LTKP29376 864 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 CCT5P48643 541 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 AGFG1P52594 562 aaKnown RBP10.72□□□□□ -0.69
CD9-207ENST00000538418 CNN3Q15417 329 aaKnown RBP10.72□□□□□ -0.69
CD9-207ENST00000538418 ANO6Q4KMQ2 910 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 CATSPEREQ5SY80 951 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 GGT6Q6P531 493 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 MMS22LQ6ZRQ5 1243 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 BEND4Q6ZU67 534 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 SAPCD2Q86UD0 394 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 PHYKPLQ8IUZ5 450 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 OR2C3Q8N628 320 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 C7orf31Q8N865 590 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 WHAMMQ8TF30 809 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.72□□□□□ -0.69
CD9-207ENST00000538418 TBC1D32Q96NH3 1257 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 IRX2Q9BZI1 471 aaPredicted RBP10.72□□□□□ -0.69
CD9-207ENST00000538418 RC3H2Q9HBD1 1191 aaKnown RBP10.72□□□□□ -0.69
CD9-207ENST00000538418 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 PCDHGB3Q9Y5G1 929 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 SCINQ9Y6U3 715 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 A2MP01023 1474 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 ABCA6Q8N139 1617 aa10.72□□□□□ -0.69
CD9-207ENST00000538418 CAPN8A6NHC0 703 aa10.71□□□□□ -0.69
CD9-207ENST00000538418 PPP1R11O60927 126 aaPredicted RBP10.71□□□□□ -0.69
CD9-207ENST00000538418 GJA4P35212 333 aa10.71□□□□□ -0.69
CD9-207ENST00000538418 NRG1Q02297 640 aaPredicted RBP10.71□□□□□ -0.69
CD9-207ENST00000538418 KCTD1Q719H9 257 aa10.71□□□□□ -0.69
CD9-207ENST00000538418 DHX29Q7Z478 1369 aaKnown RBP10.71□□□□□ -0.69
CD9-207ENST00000538418 DZIP1LQ8IYY4 767 aaKnown RBP10.71□□□□□ -0.69
CD9-207ENST00000538418 SPATA5Q8NB90 893 aa10.71□□□□□ -0.69
CD9-207ENST00000538418 CCT6BQ92526 530 aa10.71□□□□□ -0.69
CD9-207ENST00000538418 FCRL2Q96LA5 508 aaPredicted RBP10.71□□□□□ -0.69
CD9-207ENST00000538418 WNT8AQ9H1J5 351 aa10.71□□□□□ -0.69
CD9-207ENST00000538418 KIDINS220Q9ULH0 1771 aa10.71□□□□□ -0.69
CD9-207ENST00000538418 STRCQ7RTU9 1775 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 PLA2R1Q13018 1463 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 PRSS38A1L453 326 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 ELL2O00472 640 aaPredicted RBP10.7□□□□□ -0.7
CD9-207ENST00000538418 FUCA1P04066 466 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 SRGNP10124 158 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 ADMP35318 185 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 PRIM2P49643 509 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 DUSP4Q13115 394 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 NKPD1Q17RQ9 610 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 SLC4A8Q2Y0W8 1093 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 MROH9Q5TGP6 573 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 RIOX2Q8IUF8 465 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 PLEKHO2Q8TD55 490 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 LRTOMTQ8WZ04 291 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 UBE2FQ969M7 185 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 CGRRF1Q99675 332 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 PDLIM7Q9NR12 457 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.7□□□□□ -0.7
CD9-207ENST00000538418 NUB1Q9Y5A7 615 aa10.7□□□□□ -0.7
CD9-207ENST00000538418 ITSN2Q9NZM3 1697 aa10.69□□□□□ -0.7
CD9-207ENST00000538418 CEP162Q5TB80 1403 aa10.69□□□□□ -0.7
CD9-207ENST00000538418 C9orf172C9J069 976 aa10.69□□□□□ -0.7
CD9-207ENST00000538418 H3BS24 57 aa10.69□□□□□ -0.7
CD9-207ENST00000538418 RNF225M0QZC1 329 aaPredicted RBP10.69□□□□□ -0.7
CD9-207ENST00000538418 MGEA5O60502 916 aa10.69□□□□□ -0.7
CD9-207ENST00000538418 BUB1BO60566 1050 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms