RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 PDCD2LQ9BRP1 358 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 CRACR2AQ9BSW2 395 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 STRA6Q9BX79 667 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 PDGFDQ9GZP0 370 aaPredicted RBP7.24□□□□□ -1.25
USP28-206ENST00000538224 VIPAS39Q9H9C1 493 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 RAVER2Q9HCJ3 691 aaKnown RBP7.24□□□□□ -1.25
USP28-206ENST00000538224 PXMP2Q9NR77 195 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 RNF146Q9NTX7 359 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 TMOD4Q9NZQ9 345 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 CNOT7Q9UIV1 285 aaKnown RBP7.24□□□□□ -1.25
USP28-206ENST00000538224 PRDM4Q9UKN5 801 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 PCDHGC5Q9Y5F6 944 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 CAPN6Q9Y6Q1 641 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 LCTP09848 1927 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 NFASCO94856 1347 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 LRRC37A2A6NM11 1700 aa7.24□□□□□ -1.25
USP28-206ENST00000538224 DDX39AO00148 427 aaKnown RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 VWA5AO00534 786 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 MAP2K7O14733 419 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 CLIC2O15247 247 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 PMM2O15305 246 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 DHX15O43143 795 aaKnown RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 TLR2O60603 784 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 MOCS3O95396 460 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 EIF2AK2P19525 551 aaKnown RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 YWHABP31946 246 aaKnown RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 FMO5P49326 533 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 SMTNP53814 917 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 NCKAP1LP55160 1127 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 NPEPPSP55786 919 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 MRPS9P82933 396 aaKnown RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 RASSF7Q02833 373 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 MAPK7Q13164 816 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 ITGB3BPQ13352 177 aaPredicted RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 CLUL1Q15846 466 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 KIAA0753Q2KHM9 967 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 SUPT20HL1Q3ZLR7 823 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 HSP90B2PQ58FF3 399 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 BEND6Q5SZJ8 279 aaPredicted RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 IRF2BP2Q7Z5L9 587 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 CPXCR1Q8N123 301 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 GOLGA6L1Q8N7Z2 621 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 MCPH1Q8NEM0 835 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 RBM46Q8TBY0 533 aaKnown RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 NSUN6Q8TEA1 469 aaKnown RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 CAPZA3Q96KX2 299 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 FAM81BQ96LP2 452 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 WRNIP1Q96S55 665 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 FIZ1Q96SL8 496 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP28-206ENST00000538224 TEX13BQ9BXU2 312 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 FUT8Q9BYC5 575 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 STK33Q9BYT3 514 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 ACAD9Q9H845 621 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 MLXIPQ9HAP2 919 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 MED4Q9NPJ6 270 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 COL20A1Q9P218 1284 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 APEX2Q9UBZ4 518 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 BCS1LQ9Y276 419 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 GJA3Q9Y6H8 435 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 ZHX2Q9Y6X8 837 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 SBF1O95248 1867 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 DOCK5Q9H7D0 1870 aa7.23□□□□□ -1.25
USP28-206ENST00000538224 ASTN2O75129 1339 aaPredicted RBP7.23□□□□□ -1.25
USP28-206ENST00000538224 A0A087X0T9 212 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 F8VZ95 297 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 SEC31AO94979 1220 aaKnown RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 ZBTB7AO95365 584 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 PSAPP07602 524 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 H2AFZP0C0S5 128 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 FAM228BP0C875 321 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 PTPRAP18433 802 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 ERCC3P19447 782 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 SLC9A1P19634 815 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 TNFRSF8P28908 595 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 DSG3P32926 999 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 SOX5P35711 763 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 PLA2G4AP47712 749 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 CASP4P49662 377 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 CYP2J2P51589 502 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 RTP1P59025 263 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 VSNL1P62760 191 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 TNNC1P63316 161 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 GTF2BQ00403 316 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 PTK2Q05397 1052 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 SPP2Q13103 211 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 DMP1Q13316 513 aaPredicted RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 SMC1AQ14683 1233 aaKnown RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 COG2Q14746 738 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 TBC1D10BQ4KMP7 808 aaPredicted RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 MUM1L1Q5H9M0 696 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 SNRNP48Q6IEG0 339 aaKnown RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 DPY19L2P1Q6NXN4 242 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 ALKBH5Q6P6C2 394 aaKnown RBP7.22□□□□□ -1.25
USP28-206ENST00000538224 NSMFQ6X4W1 530 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 SLC30A10Q6XR72 485 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 H2AFVQ71UI9 128 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 VSIG10LQ86VR7 867 aa7.22□□□□□ -1.25
USP28-206ENST00000538224 CREG2Q8IUH2 290 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms