RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SNED1Q8TER0 1413 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 HBP1O60381 514 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 SGPL1O95470 568 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 TRIM49P0CI25 452 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 TRIM49CP0CI26 452 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 SMC1AQ14683 1233 aaKnown RBP7.94□□□□□ -1.14
MSH6-209ENST00000538136 EPHA7Q15375 998 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 PCNX4Q63HM2 1172 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 HAUS6Q7Z4H7 955 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 KIAA0319LQ8IZA0 1049 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 CEP120Q8N960 986 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 GIMAP8Q8ND71 665 aaPredicted RBP7.94□□□□□ -1.14
MSH6-209ENST00000538136 MTIF3Q9H2K0 278 aaKnown RBP7.94□□□□□ -1.14
MSH6-209ENST00000538136 SYNRGQ9UMZ2 1314 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 TLL1O43897 1013 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 PDGFRBP09619 1106 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 TRIM21P19474 475 aaKnown RBP7.94□□□□□ -1.14
MSH6-209ENST00000538136 NR2F2P24468 414 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 ADAM9Q13443 819 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 SH3RF1Q7Z6J0 888 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 HACE1Q8IYU2 909 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 LMBR1Q8WVP7 490 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 IWS1Q96ST2 819 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 MED10Q9BTT4 135 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 C11orf49Q9H6J7 331 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 CYP26B1Q9NR63 512 aa7.94□□□□□ -1.14
MSH6-209ENST00000538136 DUSP11O75319 330 aaKnown RBP7.93□□□□□ -1.14
MSH6-209ENST00000538136 PRKCBP05771 671 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 PHKA2P46019 1235 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 CUL4AQ13619 759 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 TAF3Q5VWG9 929 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 LLGL2Q6P1M3 1020 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 PGLYRP2Q96PD5 576 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 REEP2Q9BRK0 252 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 ANP32EQ9BTT0 268 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 ZDHHC9Q9Y397 364 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 SHANK3Q9BYB0 1731 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 CETN3O15182 167 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 B4GALT5O43286 388 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 GCLMP48507 274 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 CASP4P49662 377 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 CAP1Q01518 475 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 KCNA1Q09470 495 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 CETN1Q12798 172 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 GPRASP2Q96D09 838 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 KIF12Q96FN5 646 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 GAD1Q99259 594 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 WDR19Q8NEZ3 1342 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 GPR179Q6PRD1 2367 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 BNIP3LO60238 219 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 CNMDO75829 334 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 TPM3P06753 285 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 GRB14Q14449 540 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 SHC4Q6S5L8 630 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 C12orf42Q96LP6 360 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 CCDC94Q9BW85 323 aaPredicted RBP7.93□□□□□ -1.14
MSH6-209ENST00000538136 ANO10Q9NW15 660 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 hCG_1984214I3L0E3 225 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 TADA2AO75478 443 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 RPN1P04843 607 aaKnown RBP7.93□□□□□ -1.14
MSH6-209ENST00000538136 MMP3P08254 477 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 SFNP31947 248 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 OAZ1P54368 228 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 MLLT1Q03111 559 aaPredicted RBP7.93□□□□□ -1.14
MSH6-209ENST00000538136 BFSP2Q13515 415 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 KCNV1Q6PIU1 500 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 PPFIBP1Q86W92 1011 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 PALB2Q86YC2 1186 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 ZNF713Q8N859 430 aaPredicted RBP7.93□□□□□ -1.14
MSH6-209ENST00000538136 GLIS3Q8NEA6 775 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 NELFBQ8WX92 580 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 ARID3AQ99856 593 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 SH3GLB2Q9NR46 395 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 NFE2L3Q9Y4A8 694 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 PCDHB7Q9Y5E2 793 aa7.93□□□□□ -1.14
MSH6-209ENST00000538136 MSCO60682 206 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 YEATS4O95619 227 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 CPB1P15086 417 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 LONP1P36776 959 aaKnown RBP7.92□□□□□ -1.14
MSH6-209ENST00000538136 ALDH7A1P49419 539 aaKnown RBP7.92□□□□□ -1.14
MSH6-209ENST00000538136 FKBP15Q5T1M5 1219 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 GLB1LQ6UWU2 654 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 POP1Q99575 1024 aaKnown RBP7.92□□□□□ -1.14
MSH6-209ENST00000538136 GOLPH3LQ9H4A5 285 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 A0A1W2PQ45 241 aaPredicted RBP7.92□□□□□ -1.14
MSH6-209ENST00000538136 A0A1W2PQY0 241 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 TMEM110-MUSTN1A8MSY1 372 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 OPLAHO14841 1288 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 SNHG28P0DPA3 235 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 ELF1P32519 619 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 FUT2Q10981 343 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 CCDC183Q5T5S1 534 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 GDF6Q6KF10 455 aaPredicted RBP7.92□□□□□ -1.14
MSH6-209ENST00000538136 BTNL9Q6UXG8 535 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 OR6B3Q8NGW1 331 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 TMEM169Q96HH4 297 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 FAM167AQ96KS9 214 aa7.92□□□□□ -1.14
MSH6-209ENST00000538136 RPF1Q9H9Y2 349 aaKnown RBP7.92□□□□□ -1.14
MSH6-209ENST00000538136 SLC4A7Q9Y6M7 1214 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms