RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 EXOC3O60645 756 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 ZRANB2O95218 330 aaKnown RBP eCLIP19.1■□□□□ 0.65
SNX17-210ENST00000537606 PNMA6AP0CW24 399 aaPredicted RBP19.1■□□□□ 0.65
SNX17-210ENST00000537606 UCHL3P15374 230 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 ASTE1Q2TB18 679 aaPredicted RBP19.1■□□□□ 0.65
SNX17-210ENST00000537606 ZNF746Q6NUN9 644 aaPredicted RBP19.1■□□□□ 0.65
SNX17-210ENST00000537606 NOA1Q8NC60 698 aaKnown RBP19.1■□□□□ 0.65
SNX17-210ENST00000537606 ANKZF1Q9H8Y5 726 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 MLXIPQ9HAP2 919 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 GCNT4Q9P109 453 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 AJAP1Q9UKB5 411 aaPredicted RBP19.1■□□□□ 0.65
SNX17-210ENST00000537606 FRMD4BQ9Y2L6 1034 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 RHOXF2BP0C7M4 288 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 MAGEA1P43355 309 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 KLHDC7AQ5VTJ3 777 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 LBX2Q6XYB7 198 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 HAUS6Q7Z4H7 955 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 ZSWIM2Q8NEG5 633 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 RHOXF2Q9BQY4 288 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.1■□□□□ 0.65
SNX17-210ENST00000537606 JPH1Q9HDC5 661 aaPredicted RBP19.1■□□□□ 0.65
SNX17-210ENST00000537606 DMAC2Q9NW81 257 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 FAM53CQ9NYF3 392 aa19.1■□□□□ 0.65
SNX17-210ENST00000537606 GBP6Q6ZN66 633 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 SEPT14Q6ZU15 432 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 TRAPPC11Q7Z392 1133 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 KRT222Q8N1A0 295 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 CAPZA3Q96KX2 299 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 CEP170P1Q96L14 293 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 PNKPQ96T60 521 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 CBWD1Q9BRT8 395 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 MAFGO15525 162 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 SERPING1P05155 500 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 IREB2P48200 963 aaKnown RBP19.09■□□□□ 0.65
SNX17-210ENST00000537606 CC2D1AQ6P1N0 951 aaPredicted RBP19.09■□□□□ 0.65
SNX17-210ENST00000537606 NCAPG2Q86XI2 1143 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 CCDC60Q8IWA6 550 aaPredicted RBP19.09■□□□□ 0.65
SNX17-210ENST00000537606 DRC1Q96MC2 740 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 SPAG5Q96R06 1193 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 SLC9A2Q9UBY0 812 aa19.09■□□□□ 0.65
SNX17-210ENST00000537606 UBE4BO95155 1302 aa19.08■□□□□ 0.65
SNX17-210ENST00000537606 WDR90Q96KV7 1748 aa19.08■□□□□ 0.65
SNX17-210ENST00000537606 CTAGE15A4D2H0 777 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CCDC169A6NNP5 214 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 SASH3O75995 380 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 LCA5LO95447 670 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CTAGE8P0CG41 777 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 ACTR2P61160 394 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 KLHL30Q0D2K2 578 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 BMS1Q14692 1282 aaKnown RBP19.08■□□□□ 0.64
SNX17-210ENST00000537606 WHAMMP3Q1A5X7 153 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CBWD6Q4V339 395 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CBWD3Q5JTY5 395 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CBWD5Q5RIA9 395 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 ZNF662Q6ZS27 426 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CYFIP1Q7L576 1253 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CTAGE6Q86UF2 777 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CTAGE4Q8IX94 777 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 SECISBP2LQ93073 1101 aaKnown RBP19.08■□□□□ 0.64
SNX17-210ENST00000537606 ZBTB9Q96C00 473 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 SIX2Q9NPC8 291 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 ADAMTS1Q9UHI8 967 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CAPN6Q9Y6Q1 641 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 MYPNQ86TC9 1320 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 ZNF185O15231 689 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 MOCS3O95396 460 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 MAPK8IP2Q13387 824 aaPredicted RBP19.08■□□□□ 0.64
SNX17-210ENST00000537606 ASIC2Q16515 512 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 CDCA5Q96FF9 252 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 NUCKS1Q9H1E3 243 aaKnown RBP19.08■□□□□ 0.64
SNX17-210ENST00000537606 RNF216Q9NWF9 866 aaPredicted RBP19.08■□□□□ 0.64
SNX17-210ENST00000537606 SALL4Q9UJQ4 1053 aa19.08■□□□□ 0.64
SNX17-210ENST00000537606 SSU72P8A0A1W2PR75 194 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 SPATA31C2B4DYI2 1134 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 DLG4P78352 724 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 IRX3P78415 501 aaPredicted RBP19.07■□□□□ 0.64
SNX17-210ENST00000537606 NFIL3Q16649 462 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 GNPTABQ3T906 1256 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 DNAAF5Q86Y56 855 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 ZNF526Q8TF50 670 aaPredicted RBP19.07■□□□□ 0.64
SNX17-210ENST00000537606 UBE2Q2Q8WVN8 375 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 SYN2Q92777 582 aaPredicted RBP19.07■□□□□ 0.64
SNX17-210ENST00000537606 ACCSQ96QU6 501 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 PLCB1Q9NQ66 1216 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 ANKEF1Q9NU02 776 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 LOXHD1Q8IVV2 1947 aa19.07■□□□□ 0.64
SNX17-210ENST00000537606 A0A087X0T9 212 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 FAM228BP0C875 321 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 FMO5P49326 533 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 TUBB2AQ13885 445 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 STXBP2Q15833 593 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 EEPD1Q7L9B9 569 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 CHST13Q8NET6 341 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 MMS19Q96T76 1030 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 SENP7Q9BQF6 1050 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 TUBB2BQ9BVA1 445 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 AIPL1Q9NZN9 384 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 SEPT9Q9UHD8 586 aaPredicted RBP19.06■□□□□ 0.64
SNX17-210ENST00000537606 SAR1BQ9Y6B6 198 aa19.06■□□□□ 0.64
SNX17-210ENST00000537606 STBD1O95210 358 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms