RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 BMP15O95972 392 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 LDHAP00338 332 aaKnown RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 CDK4P11802 303 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 NFKBIAP25963 317 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 IGHMBP2P38935 993 aaKnown RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 DSG1Q02413 1049 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 MTFR1Q15390 333 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 SMUG1Q53HV7 270 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 SLC2A7Q6PXP3 512 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 MIGA2Q7L4E1 593 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 PHLDB2Q86SQ0 1253 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 PASD1Q8IV76 773 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 MB21D2Q8IYB1 491 aaPredicted RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 ZBED8Q8IZ13 594 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 NUP93Q8N1F7 819 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 FAM133AQ8N9E0 248 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 CLIC5Q9NZA1 410 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 ANGPTL2Q9UKU9 493 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 PCDHB6Q9Y5E3 794 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 MED1Q15648 1581 aaPredicted RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 NRKQ7Z2Y5 1582 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 MYH2Q9UKX2 1941 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 PALLDQ8WX93 1383 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 PSMA7O14818 248 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 PSMG1O95456 288 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 MMP1P03956 469 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 VDRP11473 427 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 PRCPP42785 496 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 KIF22Q14807 665 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 NAB2Q15742 525 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 EAPPQ56P03 285 aaPredicted RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 LSM14AQ8ND56 463 aaKnown RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 GAB3Q8WWW8 586 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 PHKBQ93100 1093 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 SLC7A6OSQ96CW6 309 aaPredicted RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 EPSTI1Q96J88 318 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 KIAA1683Q9H0B3 1180 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 FAM32AQ9Y421 112 aaKnown RBP9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 SPO11Q9Y5K1 396 aa9.17□□□□□ -0.94
SRGAP1-202ENST00000537556 STK36Q9NRP7 1315 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 A0A087X0B3 334 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 KRIT1O00522 736 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 KDM1AO60341 852 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 TBX10O75333 385 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 TMED10P49755 219 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 CDR2Q01850 454 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 SSRP1Q08945 709 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 MGAT5Q09328 741 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 KCNMA1Q12791 1236 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 ZBTB17Q13105 803 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 LRRC14Q15048 493 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 SOGA3Q5TF21 947 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 FAM186BQ8IYM0 893 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 SYT2Q8N9I0 419 aaPredicted RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 CXorf38Q8TB03 319 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 ITPKCQ96DU7 683 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 TGS1Q96RS0 853 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 SH3GL1Q99961 368 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 DRC3Q9H069 523 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 EURLQ9NYK6 297 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 DBNLQ9UJU6 430 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 ANGEL1Q9UNK9 670 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 CPDO75976 1380 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 SPECC1L-ADORA2AF8WAN1 911 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 RASGRF2O14827 1237 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 SERPINB7O75635 380 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 GSTT2P0CG29 244 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 GSTT2BP0CG30 244 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 MTIF2P46199 727 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 NEPROQ6NW34 567 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 FAM47EQ6ZV65 393 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 TMTC3Q6ZXV5 915 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 PATL1Q86TB9 770 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 TREML1Q86YW5 311 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 ADSSL1Q8N142 457 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 CEP70Q8NHQ1 597 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 MGARPQ8TDB4 240 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 VPS50Q96JG6 964 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 PITPNM3Q9BZ71 974 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 ROPN1BQ9BZX4 212 aaPredicted RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 DDX47Q9H0S4 455 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 ROPN1Q9HAT0 212 aaPredicted RBP9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 LRRC4CQ9HCJ2 640 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 AMACRQ9UHK6 382 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 PPP1R9AQ9ULJ8 1098 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 ITM2BQ9Y287 266 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 PLEKHG1Q9ULL1 1385 aa9.16□□□□□ -0.94
SRGAP1-202ENST00000537556 POTEFA5A3E0 1075 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 TRIM75PA6NK02 468 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 NDC80O14777 642 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 RPN1P04843 607 aaKnown RBP9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 POTEIP0CG38 1075 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 STX2P32856 288 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 EMP3P54852 163 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 MAP3K10Q02779 954 aa9.15□□□□□ -0.94
SRGAP1-202ENST00000537556 PPP2R5EQ16537 467 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms