RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 SMAD2Q15796 467 aaKnown RBP15.67■□□□□ 0.1
SYNE1-235ENST00000537033 MTERF2Q49AM1 385 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 XKR3Q5GH77 459 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 LRRC43Q8N309 656 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 LINC01465Q8N7H1 131 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 EFHBQ8N7U6 833 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 GJA10Q969M2 543 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 TMEM117Q9H0C3 514 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 ADAMTS10Q9H324 1103 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 TLR9Q9NR96 1032 aa15.67■□□□□ 0.1
SYNE1-235ENST00000537033 DDX25Q9UHL0 483 aaKnown RBP15.67■□□□□ 0.1
SYNE1-235ENST00000537033 FAM86C2PA6NEL3 165 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 LINC01565O15544 149 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 MBTPS2O43462 519 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 EDIL3O43854 480 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 FGF18O76093 207 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 DARSP14868 501 aaKnown RBP15.66■□□□□ 0.1
SYNE1-235ENST00000537033 IRS1P35568 1242 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 NRIP1P48552 1158 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 GPC3P51654 580 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 FAM189BP81408 668 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 ADAM15Q13444 863 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 PDE12Q6L8Q7 609 aaKnown RBP15.66■□□□□ 0.1
SYNE1-235ENST00000537033 ADGRD2Q7Z7M1 963 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 COLGALT1Q8NBJ5 622 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 FAM122AQ96E09 287 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 SLKQ9H2G2 1235 aaPredicted RBP15.66■□□□□ 0.1
SYNE1-235ENST00000537033 TLE6Q9H808 572 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 TYW1Q9NV66 732 aaKnown RBP15.66■□□□□ 0.1
SYNE1-235ENST00000537033 DACT1Q9NYF0 836 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 STK36Q9NRP7 1315 aa15.66■□□□□ 0.1
SYNE1-235ENST00000537033 M0R2N6 131 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 DCXO43602 365 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 PPM1AP35813 382 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 PLA2G5P39877 138 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 INF2Q27J81 1249 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 LETM2Q2VYF4 491 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 RBM23Q86U06 439 aaKnown RBP15.65■□□□□ 0.1
SYNE1-235ENST00000537033 RNF169Q8NCN4 708 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 ETNPPLQ8TBG4 499 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 ZNF668Q96K58 619 aaPredicted RBP15.65■□□□□ 0.1
SYNE1-235ENST00000537033 MBOAT7Q96N66 472 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 AIFM3Q96NN9 605 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 JPH2Q9BR39 696 aaPredicted RBP15.65■□□□□ 0.1
SYNE1-235ENST00000537033 NIFKQ9BYG3 293 aaKnown RBP15.65■□□□□ 0.1
SYNE1-235ENST00000537033 GCOM2Q9BZD3 368 aaPredicted RBP15.65■□□□□ 0.1
SYNE1-235ENST00000537033 C11orf16Q9NQ32 467 aa15.65■□□□□ 0.1
SYNE1-235ENST00000537033 PUF60Q9UHX1 559 aaKnown RBP15.65■□□□□ 0.1
SYNE1-235ENST00000537033 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 DDX11L8A8MPP1 907 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 PRR33A8MZF0 331 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 DKC1O60832 514 aaKnown RBP eCLIP15.64■□□□□ 0.09
SYNE1-235ENST00000537033 SRGAP2BP0DMP2 458 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 GCFC2P16383 781 aaKnown RBP15.64■□□□□ 0.09
SYNE1-235ENST00000537033 SFPQP23246 707 aaKnown RBP eCLIP15.64■□□□□ 0.09
SYNE1-235ENST00000537033 PSMC5P62195 406 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 SCRN1Q12765 414 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 ANKRD1Q15327 319 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 TARBP2Q15633 366 aaKnown RBP15.64■□□□□ 0.09
SYNE1-235ENST00000537033 NEK8Q86SG6 692 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 ECHDC2Q86YB7 292 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 MSLNLQ96KJ4 702 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 ZNF558Q96NG5 402 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 CDCA3Q99618 268 aaPredicted RBP15.64■□□□□ 0.09
SYNE1-235ENST00000537033 NAP1L4Q99733 375 aaKnown RBP15.64■□□□□ 0.09
SYNE1-235ENST00000537033 ENTPD7Q9NQZ7 604 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 HCSTQ9UBK5 93 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 KCNJ14Q9UNX9 436 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 LZTS1Q9Y250 596 aa15.64■□□□□ 0.09
SYNE1-235ENST00000537033 MARCH6O60337 910 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 EOMESO95936 686 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 KRT17Q04695 432 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 COASYQ13057 564 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 NPY5RQ15761 445 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 B3GNT9Q6UX72 402 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 ZNF410Q86VK4 478 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 WASF1Q92558 559 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 FAM20AQ96MK3 541 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 CASD1Q96PB1 797 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 PHF20Q9BVI0 1012 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 MRPL9Q9BYD2 267 aaKnown RBP15.63■□□□□ 0.09
SYNE1-235ENST00000537033 INO80BQ9C086 356 aaPredicted RBP15.63■□□□□ 0.09
SYNE1-235ENST00000537033 CWH43Q9H720 699 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 CHST12Q9NRB3 414 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 ARIH1Q9Y4X5 557 aaPredicted RBP15.63■□□□□ 0.09
SYNE1-235ENST00000537033 PCDHGC5Q9Y5F6 944 aa15.63■□□□□ 0.09
SYNE1-235ENST00000537033 A0A0U1RQF3 1178 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 TMEM150BA6NC51 233 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 SLC37A4O43826 429 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 CCNT1O60563 726 aaKnown RBP15.62■□□□□ 0.09
SYNE1-235ENST00000537033 PFKFB2O60825 505 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 EYA4O95677 639 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 FGFR4P22455 802 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 ANAPC15P60006 121 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 PLCB3Q01970 1234 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 PPP2R5CQ13362 524 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 PLPP4Q5VZY2 271 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 PPP4R3AQ6IN85 833 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 KCNT2Q6UVM3 1135 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 RHPN2Q8IUC4 686 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms