RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 MCF2L2Q86YR7 1114 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 SYTL5Q8TDW5 730 aaPredicted RBP8.15□□□□□ -1.1
YBX3-206ENST00000536823 COL26A1Q96A83 441 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 PLD4Q96BZ4 506 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 PRIMPOLQ96LW4 560 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 GLT1D1Q96MS3 346 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 MPHOSPH6Q99547 160 aaKnown RBP8.15□□□□□ -1.1
YBX3-206ENST00000536823 LBHD1Q9BQE6 289 aaPredicted RBP8.15□□□□□ -1.1
YBX3-206ENST00000536823 AMNQ9BXJ7 453 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 AP5M1Q9H0R1 490 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 VAT1LQ9HCJ6 419 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 STARD7Q9NQZ5 370 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 PDGFCQ9NRA1 345 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 PRKAG2Q9UGJ0 569 aa8.15□□□□□ -1.1
YBX3-206ENST00000536823 DMGDHQ9UI17 866 aaKnown RBP8.15□□□□□ -1.1
YBX3-206ENST00000536823 SCN10AQ9Y5Y9 1956 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 A0A0U1RQG5 324 aaPredicted RBP8.14□□□□□ -1.11
YBX3-206ENST00000536823 B4DLN1 442 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 OPLAHO14841 1288 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 DYNC1LI2O43237 492 aaPredicted RBP8.14□□□□□ -1.11
YBX3-206ENST00000536823 CYTH3O43739 400 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 PQBP1O60828 265 aaKnown RBP8.14□□□□□ -1.11
YBX3-206ENST00000536823 CLTBP09497 229 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 PTGS1P23219 599 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 MRPL12P52815 198 aaKnown RBP8.14□□□□□ -1.11
YBX3-206ENST00000536823 NRLP54845 237 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 BEX3Q00994 111 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 TRAF1Q13077 416 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 FSCN1Q16658 493 aaKnown RBP8.14□□□□□ -1.11
YBX3-206ENST00000536823 DUSP28Q4G0W2 176 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 ANKRD33Q7Z3H0 272 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 TDHQ8IZJ6 230 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 ZNF654Q8IZM8 581 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 TBC1D5Q92609 795 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 TMEM87BQ96K49 555 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 MAP3K14Q99558 947 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 C2orf49Q9BVC5 232 aaPredicted RBP8.14□□□□□ -1.11
YBX3-206ENST00000536823 SPZ1Q9BXG8 430 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 WDR11Q9BZH6 1224 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 RIOX1Q9H6W3 641 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 PRDM5Q9NQX1 630 aaPredicted RBP8.14□□□□□ -1.11
YBX3-206ENST00000536823 COL20A1Q9P218 1284 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 Q9Y3F1 56 aa8.14□□□□□ -1.11
YBX3-206ENST00000536823 KIAA1217Q5T5P2 1943 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 COL6A3P12111 3177 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 MROH7Q68CQ1 1323 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 A0A0C4DFX4 3053 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 TRIM43BA6NCK2 446 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 DCDC2CA8MYV0 355 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 ARVCFO00192 962 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 KIAA0355O15063 1070 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 NKRFO15226 690 aaKnown RBP eCLIP8.13□□□□□ -1.11
YBX3-206ENST00000536823 ZEB2O60315 1214 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 CABYRO75952 493 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 SASH3O75995 380 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 KIF5BP33176 963 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 LIFRP42702 1097 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 CDK7P50613 346 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 HSD17B4P51659 736 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 PPP2R5BQ15173 497 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 LRIT3Q3SXY7 679 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 TMEM63BQ5T3F8 832 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 NFXL1Q6ZNB6 911 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 HOMER1Q86YM7 354 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 TMTC2Q8N394 836 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 SAMD3Q8N6K7 520 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 CTCFLQ8NI51 663 aaPredicted RBP8.13□□□□□ -1.11
YBX3-206ENST00000536823 SHKBP1Q8TBC3 707 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 NSUN6Q8TEA1 469 aaKnown RBP8.13□□□□□ -1.11
YBX3-206ENST00000536823 SCFD2Q8WU76 684 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 TRIM43Q96BQ3 446 aaPredicted RBP8.13□□□□□ -1.11
YBX3-206ENST00000536823 ASIC4Q96FT7 647 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 TOX2Q96NM4 488 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 TAAR1Q96RJ0 339 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 PIGSQ96S52 555 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 IWS1Q96ST2 819 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 RMDN3Q96TC7 470 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 MYL10Q9BUA6 226 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 PCDHA1Q9Y5I3 950 aa8.13□□□□□ -1.11
YBX3-206ENST00000536823 PNMA6FA0A0J9YX94 578 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 CCDC69A6NI79 296 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 SOX1O00570 391 aaPredicted RBP8.12□□□□□ -1.11
YBX3-206ENST00000536823 CFBP00751 764 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 GNAQP50148 359 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 IDH3AP50213 366 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 TTLL4Q14679 1199 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 RTN1Q16799 776 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 CXCL17Q6UXB2 119 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 SGMS1Q86VZ5 419 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 SLC43A3Q8NBI5 491 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 OR6J1Q8NGC5 347 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 SCG3Q8WXD2 468 aaKnown RBP8.12□□□□□ -1.11
YBX3-206ENST00000536823 VTI1AQ96AJ9 217 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 LZTS2Q9BRK4 669 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 LRRC2Q9BYS8 371 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 PXMP2Q9NR77 195 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 MAP3K20Q9NYL2 800 aaKnown RBP8.12□□□□□ -1.11
YBX3-206ENST00000536823 TBX21Q9UL17 535 aa8.12□□□□□ -1.11
YBX3-206ENST00000536823 CUL9Q8IWT3 2517 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms