RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 EIF4BP23588 611 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 NPEPPSP55786 919 aa20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 FAM43BQ6ZT52 329 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 FIBCD1Q8N539 461 aa20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 ZNF579Q8NAF0 562 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 DYDC2Q96IM9 177 aa20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 ADAM2Q99965 735 aa20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 TMEM60Q9H2L4 133 aa20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 TTC12Q9H892 705 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CYP26B1Q9NR63 512 aa20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 TSHZ2Q9NRE2 1034 aa20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 RGS18Q9NS28 235 aa20.01■□□□□ 0.79
TNFRSF1A-209ENST00000536717 MUC3AQ02505 3323 aa20■□□□□ 0.79
TNFRSF1A-209ENST00000536717 ATP2B1P20020 1258 aa20■□□□□ 0.79
TNFRSF1A-209ENST00000536717 SARSP49591 514 aaKnown RBP20■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CYP4A11Q02928 519 aa20■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CTTNQ14247 550 aaKnown RBP20■□□□□ 0.79
TNFRSF1A-209ENST00000536717 THEGQ9P2T0 379 aa20■□□□□ 0.79
TNFRSF1A-209ENST00000536717 C9IYK1 514 aa19.99■□□□□ 0.79
TNFRSF1A-209ENST00000536717 DLL1O00548 723 aa19.99■□□□□ 0.79
TNFRSF1A-209ENST00000536717 SLITRK3O94933 977 aa19.99■□□□□ 0.79
TNFRSF1A-209ENST00000536717 STAG3L1P0CL83 205 aa19.99■□□□□ 0.79
TNFRSF1A-209ENST00000536717 TXKP42681 527 aa19.99■□□□□ 0.79
TNFRSF1A-209ENST00000536717 BTG3Q14201 252 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF1A-209ENST00000536717 DSC3Q14574 896 aa19.99■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CLP1Q92989 425 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-209ENST00000536717 C1orf112Q9NSG2 853 aa19.99■□□□□ 0.79
TNFRSF1A-209ENST00000536717 PLXNA4Q9HCM2 1894 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 DENND3A2RUS2 1198 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 H3BNC9 293 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 ZBTB39O15060 712 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 DARSP14868 501 aaKnown RBP19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 YWHABP31946 246 aaKnown RBP19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 MCM7P33993 719 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 GATMP50440 423 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 SLC24A5Q71RS6 500 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CEP170P1Q96L14 293 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 HSD17B14Q9BPX1 270 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 EIF2AK1Q9BQI3 630 aaKnown RBP19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 COL25A1Q9BXS0 654 aaPredicted RBP19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 DHX33Q9H6R0 707 aaKnown RBP19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 ZSWIM4Q9H7M6 989 aa19.98■□□□□ 0.79
TNFRSF1A-209ENST00000536717 C5orf67F2Z3F1 127 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 PDCP20941 246 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 IBSPP21815 317 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 DNM2P50570 870 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 LARP1BQ659C4 914 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 NOSTRINQ8IVI9 506 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CMTR2Q8IYT2 770 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 NLRP7Q8WX94 980 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 SCLT1Q96NL6 688 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 SUCLA2Q9P2R7 463 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 RBM19Q9Y4C8 960 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 PPME1Q9Y570 386 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 A0A087WZ62 844 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 POTEMA6NI47 508 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CSDE1O75534 798 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 FGFR4P22455 802 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CTNNB1P35222 781 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 BMPR1AP36894 532 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 FAM189BP81408 668 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CDC42EP1Q00587 391 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 GPM6BQ13491 265 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 PAN2Q504Q3 1202 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 RHPN2Q8IUC4 686 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 KSR1Q8IVT5 923 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 TPH2Q8IWU9 490 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 SPRYD3Q8NCJ5 442 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 ATXN2LQ8WWM7 1075 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 JPH2Q9BR39 696 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 FDXACB1Q9BRP7 624 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 DAXXQ9UER7 740 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 LRFN2Q9ULH4 789 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 PCDHB7Q9Y5E2 793 aa19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 MRPL42Q9Y6G3 142 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-209ENST00000536717 H3BQV1 296 aa19.96■□□□□ 0.79
TNFRSF1A-209ENST00000536717 U2AF2P26368 475 aaKnown RBP eCLIP19.96■□□□□ 0.79
TNFRSF1A-209ENST00000536717 SKIV2LQ15477 1246 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1A-209ENST00000536717 ZNF174Q15697 407 aa19.96■□□□□ 0.79
TNFRSF1A-209ENST00000536717 NEK9Q8TD19 979 aa19.96■□□□□ 0.79
TNFRSF1A-209ENST00000536717 SLC7A3Q8WY07 619 aa19.96■□□□□ 0.79
TNFRSF1A-209ENST00000536717 MRPL38Q96DV4 380 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1A-209ENST00000536717 GCOM2Q9BZD3 368 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1A-209ENST00000536717 RWDD3Q9Y3V2 267 aa19.96■□□□□ 0.79
TNFRSF1A-209ENST00000536717 LYPLA2O95372 231 aa19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 RB1P06400 928 aa19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 POLGP54098 1239 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ORC2Q13416 577 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 XKR9Q5GH70 373 aa19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TTC38Q5R3I4 469 aa19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 FAM102BQ5T8I3 360 aa19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 OTUD6AQ7L8S5 288 aa19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ZNF410Q86VK4 478 aa19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 BMP2KQ9NSY1 1161 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ZSCAN20P17040 1043 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 RFC5P40937 340 aa19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TRAPPC10P48553 1259 aa19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TFF2Q03403 129 aa19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 GNL2Q13823 731 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TJAP1Q5JTD0 557 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms