RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 HAS1Q92839 578 aa16.04■□□□□ 0.16
RTN3P1-201ENST00000536295 LMAN2LQ9H0V9 348 aa16.04■□□□□ 0.16
RTN3P1-201ENST00000536295 ATP6V0A4Q9HBG4 840 aa16.04■□□□□ 0.16
RTN3P1-201ENST00000536295 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
RTN3P1-201ENST00000536295 MMP1P03956 469 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 ITGB1P05556 798 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 DARSP14868 501 aaKnown RBP16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 QARSP47897 775 aaKnown RBP16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 DNM2P50570 870 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 ST3GAL1Q11201 340 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 TRIM29Q14134 588 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 LEXMQ3ZCV2 418 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 FAM43BQ6ZT52 329 aaPredicted RBP16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 ZNF710Q8N1W2 664 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 RNF169Q8NCN4 708 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 TNFRSF25Q93038 417 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 P2RX5Q93086 422 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 CEP89Q96ST8 783 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 TMEM161AQ9NX61 479 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 CLDND1Q9NY35 253 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 SUCLA2Q9P2R7 463 aaPredicted RBP16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 HCSTQ9UBK5 93 aa16.03■□□□□ 0.16
RTN3P1-201ENST00000536295 A0A087WZ62 844 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 BTBD18B2RXH4 712 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 TBX3O15119 743 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 MAFO75444 373 aaPredicted RBP16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 DNAJB1P25685 340 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 NPEPPSP55786 919 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 FAM189BP81408 668 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 RHPN2Q8IUC4 686 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 DIS3L2Q8IYB7 885 aaKnown RBP16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 SPPL3Q8TCT6 385 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 PABPC5Q96DU9 382 aaKnown RBP16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 FDXACB1Q9BRP7 624 aaPredicted RBP16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 GCOM2Q9BZD3 368 aaPredicted RBP16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 IGFLR1Q9H665 355 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 CYP26B1Q9NR63 512 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 BMP2KQ9NSY1 1161 aaPredicted RBP16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 WRAP73Q9P2S5 460 aaPredicted RBP16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 KIAA1671Q9BY89 1806 aa16.02■□□□□ 0.16
RTN3P1-201ENST00000536295 IGKV6-21A0A0C4DH24 114 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 DKC1O60832 514 aaKnown RBP eCLIP16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 P4HBP07237 508 aaKnown RBP16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 GTF2F1P35269 517 aaKnown RBP eCLIP16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 GUCY1B3Q02153 619 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 CYP4A11Q02928 519 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 HYAL1Q12794 435 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 CAMK1Q14012 370 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 EPHA7Q15375 998 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 NAALADL2Q58DX5 795 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 PTCRAQ6ISU1 281 aaPredicted RBP16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 KSR1Q8IVT5 923 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 CCDC83Q8IWF9 413 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 SLFN12Q8IYM2 578 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 ZNF579Q8NAF0 562 aaKnown RBP16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 POF1BQ8WVV4 589 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 DYDC2Q96IM9 177 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 CEP170P1Q96L14 293 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 NLRP4Q96MN2 994 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 LXNQ9BS40 222 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 ELAC1Q9H777 363 aaKnown RBP16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 AAASQ9NRG9 546 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 TYW1Q9NV66 732 aaKnown RBP16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 RGL1Q9NZL6 768 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 PCDHB12Q9Y5F1 795 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 MUC3AQ02505 3323 aa16.01■□□□□ 0.15
RTN3P1-201ENST00000536295 IL9P15248 144 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 IRS1P35568 1242 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 POLGP54098 1239 aaPredicted RBP16■□□□□ 0.15
RTN3P1-201ENST00000536295 CTTNQ14247 550 aaKnown RBP16■□□□□ 0.15
RTN3P1-201ENST00000536295 CALCRLQ16602 461 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 ECHDC2Q86YB7 292 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 THNSL1Q8IYQ7 743 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 ABI1Q8IZP0 508 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 NEK9Q8TD19 979 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 SLC7A3Q8WY07 619 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 JPH2Q9BR39 696 aaPredicted RBP16■□□□□ 0.15
RTN3P1-201ENST00000536295 BRWD1Q9NSI6 2320 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 ATG2AQ2TAZ0 1938 aa16■□□□□ 0.15
RTN3P1-201ENST00000536295 WNT7AO00755 349 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 ATP2B1P20020 1258 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 SFPQP23246 707 aaKnown RBP eCLIP15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 YWHABP31946 246 aaKnown RBP15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 CDC42EP1Q00587 391 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 SPIRE1Q08AE8 756 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 CLUL1Q15846 466 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 ADGRD2Q7Z7M1 963 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 TPH2Q8IWU9 490 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 COLGALT1Q8NBJ5 622 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 TMEM143Q96AN5 459 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 CASD1Q96PB1 797 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 TMEM117Q9H0C3 514 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 CWH43Q9H720 699 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 RNF19AQ9NV58 838 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 PCDHGC5Q9Y5F6 944 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 MYO7AQ13402 2215 aa15.99■□□□□ 0.15
RTN3P1-201ENST00000536295 FNDC1Q4ZHG4 1894 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms