RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 A0A087X0B3 334 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 H0YGN5 161 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 FOXD2O60548 495 aaPredicted RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 GLRX3O76003 335 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 TMCC1O94876 653 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 COPB2P35606 906 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 KPNA1P52294 538 aaPredicted RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 COPS2P61201 443 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 MGAT5Q09328 741 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 TUBB2AQ13885 445 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 LRP8Q14114 963 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 TNIP1Q15025 636 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 SAFBQ15424 915 aaKnown RBP eCLIP4.03□□□□□ -1.76
MCF2-210ENST00000536274 SKIV2LQ15477 1246 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 SHROOM1Q2M3G4 852 aaPredicted RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 SLC44A4Q53GD3 710 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 LRRC8BQ6P9F7 803 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 CCDC80Q76M96 950 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 MMGT1Q8N4V1 131 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 TEX9Q8N6V9 391 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 SLC43A3Q8NBI5 491 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 PPFIBP2Q8ND30 876 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 MORC4Q8TE76 937 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 FBF1Q8TES7 1133 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 SCG3Q8WXD2 468 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 CAVIN3Q969G5 261 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 FAM136AQ96C01 138 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 ZNF317Q96PQ6 595 aaPredicted RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 TUBB2BQ9BVA1 445 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 OSBPL10Q9BXB5 764 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 AP1M1Q9BXS5 423 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 SLC7A5P2Q9GIP4 190 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 VPS33BQ9H267 617 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 PSTPIP2Q9H939 334 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 DNAJC17Q9NVM6 304 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.03□□□□□ -1.76
MCF2-210ENST00000536274 KIAA1522Q9P206 1035 aaPredicted RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 GGA2Q9UJY4 613 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 HPS5Q9UPZ3 1129 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 NFS1Q9Y697 457 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 GOLGA6L10A0A0M3HER8 536 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 HTR3EA5X5Y0 456 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 GRIA2P42262 883 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 CCT4P50991 539 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 ERVK-9P63128 1117 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 BTKQ06187 659 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 LBRQ14739 615 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 LRRC36Q1X8D7 754 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 KHDC1Q4VXA5 237 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 PAOXQ6QHF9 649 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 TRIM67Q6ZTA4 783 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 ZNF365Q70YC5 407 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 SATL1Q86VE3 508 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 NME9Q86XW9 330 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 CNGA4Q8IV77 575 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 IQCF2Q8IXL9 164 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 CCDC65Q8IXS2 484 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.03□□□□□ -1.76
MCF2-210ENST00000536274 RNF10Q8N5U6 811 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 DEPTORQ8TB45 409 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 ENOX1Q8TC92 643 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.03□□□□□ -1.76
MCF2-210ENST00000536274 EAF2Q96CJ1 260 aaPredicted RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 LTV1Q96GA3 475 aaPredicted RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 HHIPL1Q96JK4 782 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 AGAP3Q96P47 875 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 IWS1Q96ST2 819 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 SPATA16Q9BXB7 569 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 NLRC4Q9NPP4 1024 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 ECHDC1Q9NTX5 307 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 CTNNAL1Q9UBT7 734 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 DBR1Q9UK59 544 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 HPSEQ9Y251 543 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 USP42Q9H9J4 1324 aaKnown RBP4.03□□□□□ -1.76
MCF2-210ENST00000536274 SYNRGQ9UMZ2 1314 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 KDM3BQ7LBC6 1761 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 PSME4Q14997 1843 aa4.03□□□□□ -1.76
MCF2-210ENST00000536274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.02□□□□□ -1.77
MCF2-210ENST00000536274 A0A087WZG4 1122 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 LOC102724428A0A0B4J2F2 783 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 MYOCOSA0A1B0GUC4 107 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 GRXCR2A6NFK2 248 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 CCDC160A6NGH7 325 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 XPOTO43592 962 aaKnown RBP4.02□□□□□ -1.77
MCF2-210ENST00000536274 CEP104O60308 925 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 KRT36O76013 467 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 PGM3O95394 542 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 ASLP04424 464 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 COL9A1P20849 921 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 OSBPP22059 807 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 CALB2P22676 271 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 ARFIP2P53365 341 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 ADARP55265 1226 aaKnown RBP4.02□□□□□ -1.77
MCF2-210ENST00000536274 SIK1P57059 783 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 KIF23Q02241 960 aaPredicted RBP4.02□□□□□ -1.77
MCF2-210ENST00000536274 ERMARDQ5T6L9 678 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 UBE3BQ7Z3V4 1068 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 ADAT2Q7Z6V5 191 aaKnown RBP4.02□□□□□ -1.77
MCF2-210ENST00000536274 ZBTB46Q86UZ6 589 aa4.02□□□□□ -1.77
MCF2-210ENST00000536274 CMTR1Q8N1G2 835 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms