RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 DR1Q01658 176 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 TFAP4Q01664 338 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 TRAF1Q13077 416 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 MAPK7Q13164 816 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 SLC29A2Q14542 456 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 GRIPAP1Q4V328 841 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 AP1ARQ63HQ0 302 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 DENND2CQ68D51 928 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 RHBDF2Q6PJF5 856 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 EPM2AIP1Q7L775 607 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-215ENST00000536145 HEATR3Q7Z4Q2 680 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 FRMD5Q7Z6J6 570 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 ZDHHC14Q8IZN3 488 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 FITM2Q8N6M3 262 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 PRELID2Q8N945 189 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 FBXO25Q8TCJ0 367 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 EPS8L3Q8TE67 593 aaKnown RBP7.5□□□□□ -1.21
CPSF7-215ENST00000536145 TBCKQ8TEA7 893 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 SCFD1Q8WVM8 642 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 C7orf43Q8WVR3 580 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 DDX17Q92841 729 aaKnown RBP7.5□□□□□ -1.21
CPSF7-215ENST00000536145 ART4Q93070 314 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 KLHL29Q96CT2 875 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 NAF1Q96HR8 494 aaKnown RBP7.5□□□□□ -1.21
CPSF7-215ENST00000536145 FAM84BQ96KN1 310 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-215ENST00000536145 TMEM237Q96Q45 408 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 CRAMP1Q96RY5 1269 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 CRNKL1Q9BZJ0 848 aaKnown RBP7.5□□□□□ -1.21
CPSF7-215ENST00000536145 TANGO6Q9C0B7 1094 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 SEMA4AQ9H3S1 761 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 RNPEPL1Q9HAU8 725 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 C6orf50Q9HD87 102 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 TMEM260Q9NX78 707 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 TMOD3Q9NYL9 352 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 NKX1-2Q9UD57 310 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-215ENST00000536145 PCYOX1Q9UHG3 505 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 AMFRQ9UKV5 643 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 PPP1R9AQ9ULJ8 1098 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 TRAF3IP3Q9Y228 551 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 SNX24Q9Y343 169 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 SNED1Q8TER0 1413 aa7.5□□□□□ -1.21
CPSF7-215ENST00000536145 DPPA5A6NC42 116 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 EVI5O60447 810 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 TCEA3O75764 348 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 FGGP02679 453 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 RARGP13631 454 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 ATP6V1C1P21283 382 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 CALB2P22676 271 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 CDC25CP30307 473 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 IGHMBP2P38935 993 aaKnown RBP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 TXKP42681 527 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 TUBP50607 506 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 LACTBP83111 547 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 ROR2Q01974 943 aaKnown RBP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 MECOMQ03112 1051 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 ADAM9Q13443 819 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 MPP2Q14168 576 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 RBBP5Q15291 538 aaKnown RBP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 SIX1Q15475 284 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 TAF11Q15544 211 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 CLUL1Q15846 466 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 CALCRLQ16602 461 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 KCTD19Q17RG1 926 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 CCDC152Q4G0S7 254 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 CCDC38Q502W7 563 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 TTC27Q6P3X3 843 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 BRINP3Q76B58 766 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 SPATA21Q7Z572 469 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 ECHDC2Q86YB7 292 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 AGGF1Q8N302 714 aaeCLIP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 GALNT15Q8N3T1 639 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 KIF2BQ8N4N8 673 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 SNX29Q8TEQ0 813 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 RFFLQ8WZ73 363 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 ALG3Q92685 438 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 FAM136AQ96C01 138 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 ZBTB10Q96DT7 871 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 BORCS6Q96GS4 357 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 IFT74Q96LB3 600 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 RMDN2Q96LZ7 410 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 SERPINB12Q96P63 405 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 TMEM47Q9BQJ4 181 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 OSBPL1AQ9BXW6 950 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 STMN4Q9H169 189 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 LRMDAQ9H2I8 198 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 TLE6Q9H808 572 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 AAASQ9NRG9 546 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 FGFR1OP2Q9NVK5 253 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 ABCF2Q9UG63 623 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 LGALS13Q9UHV8 139 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 HDAC9Q9UKV0 1011 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 RPL26L1Q9UNX3 145 aaKnown RBP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 ZNF330Q9Y3S2 320 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-215ENST00000536145 PFASO15067 1338 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 FRMPD4Q14CM0 1322 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 MROH7Q68CQ1 1323 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 IRS2Q9Y4H2 1338 aa7.49□□□□□ -1.21
CPSF7-215ENST00000536145 NHSQ6T4R5 1651 aa7.48□□□□□ -1.21
CPSF7-215ENST00000536145 GOLGA6L10A0A0M3HER8 536 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms