RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TBC1D22BQ9NU19 505 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 DBR1Q9UK59 544 aaKnown RBP14.62□□□□□ -0.07
VPS33B-202ENST00000535906 GTPBP10A4D1E9 387 aaKnown RBP14.61□□□□□ -0.07
VPS33B-202ENST00000535906 NCK2O43639 380 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 KLRC1P26715 233 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 BAATQ14032 418 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-202ENST00000535906 NFRKBQ6P4R8 1299 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 PSMB7Q99436 277 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 VIPAS39Q9H9C1 493 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 FBXL5Q9UKA1 691 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 COL11A1P12107 1806 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-202ENST00000535906 TESPA1A2RU30 521 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-202ENST00000535906 LRRIQ3A6PVS8 624 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-202ENST00000535906 K7ENM7 598 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 PPP1R12BO60237 982 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-202ENST00000535906 YWHABP31946 246 aaKnown RBP14.61□□□□□ -0.07
VPS33B-202ENST00000535906 CXCR5P32302 372 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 GYS2P54840 703 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 HMGCS2P54868 508 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 NAP1L1P55209 391 aaKnown RBP14.61□□□□□ -0.07
VPS33B-202ENST00000535906 JAM2P57087 298 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 NAB2Q15742 525 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 KIAA0753Q2KHM9 967 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 ARHGEF16Q5VV41 709 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 ZNF572Q7Z3I7 529 aaPredicted RBP14.61□□□□□ -0.07
VPS33B-202ENST00000535906 OSBPL9Q96SU4 736 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 TLR10Q9BXR5 811 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 RNF146Q9NTX7 359 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 CALCOCO1Q9P1Z2 691 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 FRMD4BQ9Y2L6 1034 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 RLFQ13129 1914 aa14.61□□□□□ -0.07
VPS33B-202ENST00000535906 CCNE2O96020 404 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 FMO5P49326 533 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 CBWD6Q4V339 395 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 CBWD3Q5JTY5 395 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 CBWD5Q5RIA9 395 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 SYCP3Q8IZU3 236 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 RDH13Q8NBN7 331 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 REPS2Q8NFH8 660 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 PICK1Q9NRD5 415 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 LARSQ9P2J5 1176 aaKnown RBP14.6□□□□□ -0.07
VPS33B-202ENST00000535906 TISP43B9A030 160 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 N4BP1O75113 896 aaKnown RBP14.6□□□□□ -0.07
VPS33B-202ENST00000535906 LYPLA2O95372 231 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 TRIM49P0CI25 452 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 TRIM49CP0CI26 452 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 FDX1P10109 184 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 ITIH3Q06033 890 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 FAM71BQ8TC56 605 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 TRPM4Q8TD43 1214 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 SGIP1Q9BQI5 828 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 AS3MTQ9HBK9 375 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 MED4Q9NPJ6 270 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 LUC7LQ9NQ29 371 aaKnown RBP14.6□□□□□ -0.07
VPS33B-202ENST00000535906 VPS18Q9P253 973 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 CD2APQ9Y5K6 639 aa14.6□□□□□ -0.07
VPS33B-202ENST00000535906 PRKCIP41743 596 aa14.59□□□□□ -0.07
VPS33B-202ENST00000535906 C2orf54Q08AI8 447 aa14.59□□□□□ -0.07
VPS33B-202ENST00000535906 HSP90B2PQ58FF3 399 aa14.59□□□□□ -0.07
VPS33B-202ENST00000535906 SNRNP48Q6IEG0 339 aaKnown RBP14.59□□□□□ -0.07
VPS33B-202ENST00000535906 DNAAF5Q86Y56 855 aa14.59□□□□□ -0.07
VPS33B-202ENST00000535906 SLC9A9Q8IVB4 645 aa14.59□□□□□ -0.07
VPS33B-202ENST00000535906 HYOU1Q9Y4L1 999 aa14.59□□□□□ -0.07
VPS33B-202ENST00000535906 BZW2Q9Y6E2 419 aaKnown RBP14.59□□□□□ -0.07
VPS33B-202ENST00000535906 BACH1O14867 736 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 EXOC3O60645 756 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 PALMO75781 387 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 PLS3P13797 630 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 TCP1P17987 556 aaKnown RBP14.58□□□□□ -0.07
VPS33B-202ENST00000535906 R3HDM1Q15032 1099 aaKnown RBP14.58□□□□□ -0.07
VPS33B-202ENST00000535906 C4orf19Q8IY42 314 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 MMGT1Q8N4V1 131 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 GOLGA5Q8TBA6 731 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 CCDC102AQ96A19 550 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 GPRC5CQ9NQ84 441 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 EHD2Q9NZN4 543 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 PNMA2Q9UL42 364 aa14.58□□□□□ -0.07
VPS33B-202ENST00000535906 ZNF214Q9UL59 606 aaPredicted RBP14.58□□□□□ -0.07
VPS33B-202ENST00000535906 NR3C2P08235 984 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 NPEPPSP55786 919 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 BFSP1Q12934 665 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 PLA2G4FQ68DD2 849 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 CCDC70Q6NSX1 233 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 VSIG10LQ86VR7 867 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 PCIF1Q9H4Z3 704 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 SMARCAL1Q9NZC9 954 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 NAGPAQ9UK23 515 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 ADAMTS5Q9UNA0 930 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 FAN1Q9Y2M0 1017 aa14.58□□□□□ -0.08
VPS33B-202ENST00000535906 WDR64B1ANS9 1081 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 MAPTP10636 758 aaKnown RBP14.57□□□□□ -0.08
VPS33B-202ENST00000535906 DSG3P32926 999 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 AARSP49588 968 aaKnown RBP eCLIP14.57□□□□□ -0.084e-6■■■■■ 30.6
VPS33B-202ENST00000535906 PSMC5P62195 406 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 TMEM132BQ14DG7 1078 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 PPP2R5AQ15172 486 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 CCNI2Q6ZMN8 369 aaPredicted RBP14.57□□□□□ -0.08
VPS33B-202ENST00000535906 APOBEC3FQ8IUX4 373 aaKnown RBP14.57□□□□□ -0.08
VPS33B-202ENST00000535906 KLRG1Q96E93 195 aa14.57□□□□□ -0.08
VPS33B-202ENST00000535906 C12orf42Q96LP6 360 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms