RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 RAB11FIP4Q86YS3 637 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 LRRC43Q8N309 656 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 CCDC148Q8NFR7 591 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 ASIC4Q96FT7 647 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 IGFLR1Q9H665 355 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 NRBP2Q9NSY0 501 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 STK39Q9UEW8 545 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 TBKBP1A7MCY6 615 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 M0R2N6 131 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 ADAMTS3O15072 1205 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 CDC45O75419 566 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 PSMD10O75832 226 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 STBD1O95210 358 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 PAPLNO95428 1278 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 OATP04181 439 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 MRE11P49959 708 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 GPC3P51654 580 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 ITIH3Q06033 890 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 JAKMIP3Q5VZ66 844 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 ANKRD54Q6NXT1 300 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 KCNT2Q6UVM3 1135 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 ECHDC2Q86YB7 292 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 MRPL43Q8N983 215 aaKnown RBP12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 NECTIN4Q96NY8 510 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 MAP7D2Q96T17 732 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 OSMRQ99650 979 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 DISC1Q9NRI5 854 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 DACT1Q9NYF0 836 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 PPME1Q9Y570 386 aa12.68□□□□□ -0.38
CLSTN3-206ENST00000535668 TMEM221A6NGB7 291 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 M0R296 226 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 MSH4O15457 936 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 C1RP00736 705 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 NLRP11P59045 1033 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 GIT2Q14161 759 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 PAN2Q504Q3 1202 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 PRR16Q569H4 304 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 GALNT17Q6IS24 598 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 EFCAB12Q6NXP0 572 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 EP400NLQ6ZTU2 488 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 ZNF410Q86VK4 478 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 SLC39A11Q8N1S5 342 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 FBXL6Q8N531 539 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 DAGLBQ8NCG7 672 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 TCEANC2Q96MN5 208 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 ZNF558Q96NG5 402 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 MRPL9Q9BYD2 267 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 RHOBTB2Q9BYZ6 727 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 IRF2BPLQ9H1B7 796 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 SPG21Q9NZD8 308 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 GABBR1Q9UBS5 961 aa12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 BARX2Q9UMQ3 279 aaPredicted RBP12.67□□□□□ -0.38
CLSTN3-206ENST00000535668 VTNP04004 478 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 FGFR1P11362 822 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 ZSCAN20P17040 1043 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 POLGP54098 1239 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 PTPN5P54829 565 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 KRT17Q04695 432 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 CLUL1Q15846 466 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 PTPN21Q16825 1174 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 XKR3Q5GH77 459 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 CLLU1OSQ5K130 101 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 ALYREFQ86V81 257 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 CASP10Q92851 521 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 ADAM7Q9H2U9 754 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 TCEAL9Q9UHQ7 104 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 USTQ9Y2C2 406 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 SNX14Q9Y5W7 946 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 MYO15AQ9UKN7 3530 aa12.66□□□□□ -0.38
CLSTN3-206ENST00000535668 CFAP54Q96N23 3096 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 C2orf71A6NGG8 1288 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 DDX39AO00148 427 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 SKIP12755 728 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 PSMA5P28066 241 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 PDIA3P30101 505 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 CLCN3P51790 818 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 PRKCEQ02156 737 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 PCBP1Q15365 356 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 NPY5RQ15761 445 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 Q6ZUG5 572 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 RBM23Q86U06 439 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 CKAP2LQ8IYA6 745 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 UBALD2Q8IYN6 164 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 METTL13Q8N6R0 699 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 ETNPPLQ8TBG4 499 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 BRF1Q92994 677 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 PBXIP1Q96AQ6 731 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 UIMC1Q96RL1 719 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 TCF25Q9BQ70 676 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 INO80BQ9C086 356 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 GINS2Q9Y248 185 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 PCDHGC5Q9Y5F6 944 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 CACNA1AO00555 2505 aa12.65□□□□□ -0.38
CLSTN3-206ENST00000535668 MYO10Q9HD67 2058 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms