RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 MFSD14AQ96MC6 490 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 NCOA5Q9HCD5 579 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 ZSWIM6Q9HCJ5 1215 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 TYW1Q9NV66 732 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 DDX25Q9UHL0 483 aaKnown RBP14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 LZTS1Q9Y250 596 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 TRANK1O15050 2925 aa14.89□□□□□ -0.03
CLSTN3-205ENST00000535452 TTC3P53804 2025 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 EOMESO95936 686 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 FAM102BQ5T8I3 360 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 TWF2Q6IBS0 349 aaKnown RBP14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 MOXD1Q6UVY6 613 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 COLGALT1Q8NBJ5 622 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 TMEM40Q8WWA1 233 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 MRPS27Q92552 414 aaKnown RBP14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 SLC5A5Q92911 643 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 TCF25Q9BQ70 676 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 TM6SF1Q9BZW5 370 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 CHST12Q9NRB3 414 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 RAPGEFL1Q9UHV5 662 aa14.88□□□□□ -0.03
CLSTN3-205ENST00000535452 DDX11L8A8MPP1 907 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 GPR32O75388 356 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 FGFR1P11362 822 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 GCFC2P16383 781 aaKnown RBP14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 ATP4AP20648 1035 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 GATMP50440 423 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 GPC3P51654 580 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 EVCP57679 992 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 PSMC5P62195 406 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 RNASELQ05823 741 aaKnown RBP14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 TRIM29Q14134 588 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 LETM2Q2VYF4 491 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 PLPP4Q5VZY2 271 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 CES5AQ6NT32 575 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 OTUD6AQ7L8S5 288 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 ZNF410Q86VK4 478 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 PGBD4Q96DM1 585 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 TMEM169Q96HH4 297 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 UNC45AQ9H3U1 944 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 CDHR5Q9HBB8 845 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 SPG21Q9NZD8 308 aa14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 SPTBN5Q9NRC6 3674 aaKnown RBP14.87□□□□□ -0.03
CLSTN3-205ENST00000535452 MGEA5O60502 916 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 TBX10O75333 385 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 DARSP14868 501 aaKnown RBP14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 RAB27AP51159 221 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 POLGP54098 1239 aaPredicted RBP14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 PLCB3Q01970 1234 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 COASYQ13057 564 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 SMC1AQ14683 1233 aaKnown RBP14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 NTRK3Q16288 839 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 TPRNQ4KMQ1 711 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 KCNT2Q6UVM3 1135 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 GLB1LQ6UWU2 654 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 CATSPER4Q7RTX7 472 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 RHPN2Q8IUC4 686 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 SUGP1Q8IWZ8 645 aaKnown RBP14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 URGCPQ8TCY9 931 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 FAM193BQ96PV7 902 aaPredicted RBP14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 CD320Q9NPF0 282 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 STK39Q9UEW8 545 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 PIN4Q9Y237 131 aaKnown RBP14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 PPME1Q9Y570 386 aa14.86□□□□□ -0.03
CLSTN3-205ENST00000535452 A0A0U1RQF3 1178 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 ZBTB42B2RXF5 422 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 LINC01565O15544 149 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 CCNT1O60563 726 aaKnown RBP14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 LINC00271P0C7V0 271 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 HOXB8P17481 243 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 IRS1P35568 1242 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 LTBRP36941 435 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 DLX2Q07687 328 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 GIT2Q14161 759 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 DUSP6Q16828 381 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 ELMSAN1Q6PJG2 1045 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 NEK8Q86SG6 692 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 ECHDC2Q86YB7 292 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 SLFN12Q8IYM2 578 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 CRIPAKQ8N1N5 446 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 DAGLBQ8NCG7 672 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 TCP11Q8WWU5 503 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 CASP10Q92851 521 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 FAM20AQ96MK3 541 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 NLRP4Q96MN2 994 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 NIFKQ9BYG3 293 aaKnown RBP14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 KCNH6Q9H252 994 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 SUCLA2Q9P2R7 463 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 BARX2Q9UMQ3 279 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 NR2E1Q9Y466 385 aa14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 MYH9P35579 1960 aaKnown RBP14.85□□□□□ -0.03
CLSTN3-205ENST00000535452 CYP3A7-CYP3A51PA0A087WV96 503 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 C19orf67A6NJJ6 358 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 PER2O15055 1255 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 PSMD10O75832 226 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 TDP2O95551 362 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 EYA4O95677 639 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 CYP3A7P24462 503 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 GTF2F1P35269 517 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 TECP42680 631 aa14.84□□□□□ -0.03
CLSTN3-205ENST00000535452 QARSP47897 775 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms