RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 ATP6V0A4Q9HBG4 840 aa8.76□□□□□ -1.01
CPSF7-214ENST00000535222 ZNF215Q9UL58 517 aaPredicted RBP8.76□□□□□ -1.01
CPSF7-214ENST00000535222 PCDHGA5Q9Y5G8 931 aa8.76□□□□□ -1.01
CPSF7-214ENST00000535222 COL6A6A6NMZ7 2263 aa8.76□□□□□ -1.01
CPSF7-214ENST00000535222 TICRRQ7Z2Z1 1910 aa8.76□□□□□ -1.01
CPSF7-214ENST00000535222 CARNS1A5YM72 827 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 HOXA2O43364 376 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 C1RP00736 705 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 PRB1P04280 392 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 RNF43Q68DV7 783 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 METTL7BQ6UX53 244 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 ZNF852Q6ZMS4 543 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 LRRC43Q8N309 656 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 ZNF707Q96C28 371 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-214ENST00000535222 UBL7Q96S82 380 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-214ENST00000535222 ADAM2Q99965 735 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 CELF4Q9BZC1 486 aaKnown RBP8.75□□□□□ -1.01
CPSF7-214ENST00000535222 ARRDC1-AS1Q9H2J1 176 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 TUBE1Q9UJT0 475 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 KLK13Q9UKR3 277 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 NOB1Q9ULX3 412 aaKnown RBP8.75□□□□□ -1.01
CPSF7-214ENST00000535222 MRPS17Q9Y2R5 130 aaKnown RBP8.75□□□□□ -1.01
CPSF7-214ENST00000535222 SALL2Q9Y467 1007 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-214ENST00000535222 TRPV2Q9Y5S1 764 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 CCDC171Q6TFL3 1326 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 LAMA4Q16363 1823 aa8.75□□□□□ -1.01
CPSF7-214ENST00000535222 ATMQ13315 3056 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 ASCC3Q8N3C0 2202 aaKnown RBP8.74□□□□□ -1.01
CPSF7-214ENST00000535222 CCDC195A0A1B0GUA6 201 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 MINDY4BA8MYZ0 360 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 J3QKU1 62 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 K7ESF4 209 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 HYAL3O43820 417 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-214ENST00000535222 NTRK1P04629 796 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 HSPD1P10809 573 aaKnown RBP8.74□□□□□ -1.01
CPSF7-214ENST00000535222 EIF2AK2P19525 551 aaKnown RBP8.74□□□□□ -1.01
CPSF7-214ENST00000535222 SRSF5Q13243 272 aaKnown RBP8.74□□□□□ -1.01
CPSF7-214ENST00000535222 OS9Q13438 667 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-214ENST00000535222 PARM1Q6UWI2 310 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 STOX1Q6ZVD7 989 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 TRIM50Q86XT4 487 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 MCF2L2Q86YR7 1114 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 STK11IPQ8N1F8 1099 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 NME8Q8N427 588 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 HDAC7Q8WUI4 952 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 AUTS2Q8WXX7 1259 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 SLC39A7Q92504 469 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 ARHGAP45Q92619 1136 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 GPKOWQ92917 476 aaPredicted RBP eCLIP8.74□□□□□ -1.013e-7■■■■□ 21.6
CPSF7-214ENST00000535222 PDCD2LQ9BRP1 358 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 MAP3K20Q9NYL2 800 aaKnown RBP8.74□□□□□ -1.01
CPSF7-214ENST00000535222 STX8Q9UNK0 236 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 MYH15Q9Y2K3 1946 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 PTPRQQ9UMZ3 2332 aa8.74□□□□□ -1.01
CPSF7-214ENST00000535222 NOP56O00567 594 aaKnown RBP8.73□□□□□ -1.01
CPSF7-214ENST00000535222 AXIN1O15169 862 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 CHGBP05060 677 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 SNHG28P0DPA3 235 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 CXCL12P48061 93 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 ALDH7A1P49419 539 aaKnown RBP8.73□□□□□ -1.01
CPSF7-214ENST00000535222 PPFIA1Q13136 1202 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 NEDD9Q14511 834 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 DSC3Q14574 896 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 GRIK4Q16099 956 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 DAB2IPQ5VWQ8 1189 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 ZNF843Q8N446 348 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 TMEM87AQ8NBN3 555 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 CHMP4CQ96CF2 233 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 TMEM169Q96HH4 297 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 LRIG1Q96JA1 1093 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.73□□□□□ -1.014e-7■■■□□ 16.7
CPSF7-214ENST00000535222 EPB41L4AQ9HCS5 686 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-214ENST00000535222 VPS45Q9NRW7 570 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 STK39Q9UEW8 545 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 ABCB11O95342 1321 aa8.73□□□□□ -1.01
CPSF7-214ENST00000535222 SHROOM3Q8TF72 1996 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 RRN3P2A6NIE6 340 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 CHURC1-FNTBB4DL54 471 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 SPATA31C2B4DYI2 1134 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 H0Y626 953 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 ATXN7O15265 892 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-214ENST00000535222 SORBS3O60504 671 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 TRIM16O95361 564 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 CNPP09543 421 aaKnown RBP8.72□□□□□ -1.01
CPSF7-214ENST00000535222 FNTBP49356 437 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 HSD17B4P51659 736 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 BCAR1P56945 870 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 CCDC96Q2M329 555 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 TMEM266Q2M3C6 531 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 CCDC184Q52MB2 194 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 WDR5BQ86VZ2 330 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 TMEM173Q86WV6 379 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-214ENST00000535222 SPEM1Q8N4L4 309 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
CPSF7-214ENST00000535222 RSPH1Q8WYR4 309 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 IGSF21Q96ID5 467 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 ZC3H10Q96K80 434 aaKnown RBP8.72□□□□□ -1.01
CPSF7-214ENST00000535222 VN1R3Q9BXE9 311 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 CLMPQ9H6B4 373 aa8.72□□□□□ -1.01
CPSF7-214ENST00000535222 PAG1Q9NWQ8 432 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms