RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 CENPAP49450 140 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 AARSP49588 968 aaKnown RBP eCLIP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 MTTPP55157 894 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 GPSM2P81274 684 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 TMF1P82094 1093 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 PAK2Q13177 524 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 TCIRG1Q13488 830 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 MOGSQ13724 837 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 SHROOM1Q2M3G4 852 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 PDCD4Q53EL6 469 aaKnown RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 PRSS36Q5K4E3 855 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 SPECC1Q5M775 1068 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 SLC10A5Q5PT55 438 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 RNF187Q5TA31 235 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 INTS3Q68E01 1043 aaKnown RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 MCTP1Q6DN14 999 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 FAM117BQ6P1L5 589 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 SARM1Q6SZW1 724 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 Q6ZS46 218 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 PHLDB2Q86SQ0 1253 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 CAND1Q86VP6 1230 aaKnown RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 ERICH1Q86X53 443 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 CCDC83Q8IWF9 413 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 FAM20CQ8IXL6 584 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 STKLD1Q8NE28 680 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 ATL1Q8WXF7 558 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 TP53INP1Q96A56 240 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 CDCA5Q96FF9 252 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 MED30Q96HR3 178 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 RBM14Q96PK6 669 aaKnown RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 MTMR9Q96QG7 549 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 PRPF18Q99633 342 aaKnown RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 AIFM2Q9BRQ8 373 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 YIPF3Q9GZM5 350 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 DRC3Q9H069 523 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 PLEKHA5Q9HAU0 1116 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 ZCCHC17Q9NP64 241 aaKnown RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 RIC8AQ9NPQ8 531 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 AASDHPPTQ9NRN7 309 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 PCMTD2Q9NV79 361 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 ZMYND8Q9ULU4 1186 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-201ENST00000535076 CNPY2Q9Y2B0 182 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 COL4A3BPQ9Y5P4 624 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 PHLPP2Q6ZVD8 1323 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 SHROOM2Q13796 1616 aa5.66□□□□□ -1.5
SNHG1-201ENST00000535076 KIF28PB7ZC32 967 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 NDC80O14777 642 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 STRNO43815 780 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 BUB1BO60566 1050 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 USO1O60763 962 aaKnown RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 TACC1O75410 805 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 URI1O94763 535 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 FAM13AO94988 1023 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 H2AFB1P0C5Y9 115 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 H2AFB2P0C5Z0 115 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 EPB41P11171 864 aaKnown RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 M6PRP20645 277 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 HALP42357 657 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 POLD2P49005 469 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 MAPKAPK2P49137 400 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 THOP1P52888 689 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 POLR2FP61218 127 aaKnown RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ARHGAP4P98171 946 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 CYP4A11Q02928 519 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 UBXN1Q04323 297 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 NIPAL4Q0D2K0 466 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 TUBB2AQ13885 445 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 KIF22Q14807 665 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ERCC6LQ2NKX8 1250 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ANO4Q32M45 955 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 TNNI3KQ59H18 835 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 DEPDC1Q5TB30 811 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 CYP4A22Q5TCH4 519 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 PEAR1Q5VY43 1037 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 LMBRD2Q68DH5 695 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ZNF746Q6NUN9 644 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 SLC2A7Q6PXP3 512 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 CORO6Q6QEF8 472 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 CEP128Q6ZU80 1094 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ZNF365Q70YC5 407 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 RASGRP2Q7LDG7 609 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 KRT28Q7Z3Y7 464 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 HDGFL2Q7Z4V5 671 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 SPATA24Q86W54 205 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 SCYL3Q8IZE3 742 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 C17orf53Q8N3J3 647 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 CNNM3Q8NE01 707 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 UBASH3BQ8TF42 649 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 WDR60Q8WVS4 1066 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 GDAP1L1Q96MZ0 367 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 GPR101Q96P66 508 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ALPK1Q96QP1 1244 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 NDNQ99608 321 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ZKSCAN3Q9BRR0 538 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 HGH1Q9BTY7 390 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 TUBB2BQ9BVA1 445 aa5.65□□□□□ -1.5
SNHG1-201ENST00000535076 NAA15Q9BXJ9 866 aaKnown RBP5.65□□□□□ -1.5
SNHG1-201ENST00000535076 ADAM19Q9H013 955 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms