RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 SUCLA2Q9P2R7 463 aaPredicted RBP20.02■□□□□ 0.8
CAPRIN1-217ENST00000534825 PPME1Q9Y570 386 aa20.02■□□□□ 0.8
CAPRIN1-217ENST00000534825 SPTBN5Q9NRC6 3674 aaKnown RBP20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 SARSP49591 514 aaKnown RBP20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 TTC38Q5R3I4 469 aa20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 SLC24A5Q71RS6 500 aa20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 TMEM192Q8IY95 271 aa20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 FIBCD1Q8N539 461 aa20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 GDPD5Q8WTR4 605 aa20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 SAMD11Q96NU1 681 aa20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 JPH2Q9BR39 696 aaPredicted RBP20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 LMCD1Q9NZU5 365 aa20.01■□□□□ 0.79
CAPRIN1-217ENST00000534825 A0A087WZ62 844 aa20■□□□□ 0.79
CAPRIN1-217ENST00000534825 POTEMA6NI47 508 aa20■□□□□ 0.79
CAPRIN1-217ENST00000534825 GTPBP6O43824 516 aaPredicted RBP20■□□□□ 0.79
CAPRIN1-217ENST00000534825 CSDE1O75534 798 aaKnown RBP20■□□□□ 0.79
CAPRIN1-217ENST00000534825 STAG3L1P0CL83 205 aa20■□□□□ 0.79
CAPRIN1-217ENST00000534825 SPATA31C1P0DKV0 1188 aa20■□□□□ 0.79
CAPRIN1-217ENST00000534825 GJB2P29033 226 aa20■□□□□ 0.79
CAPRIN1-217ENST00000534825 CUL4AQ13619 759 aa20■□□□□ 0.79
CAPRIN1-217ENST00000534825 GNL2Q13823 731 aaKnown RBP20■□□□□ 0.79
CAPRIN1-217ENST00000534825 NBR1Q14596 966 aa20■□□□□ 0.79
CAPRIN1-217ENST00000534825 KSR1Q8IVT5 923 aa20■□□□□ 0.79
CAPRIN1-217ENST00000534825 CLP1Q92989 425 aaKnown RBP20■□□□□ 0.79
CAPRIN1-217ENST00000534825 FDXACB1Q9BRP7 624 aaPredicted RBP20■□□□□ 0.79
CAPRIN1-217ENST00000534825 C1orf112Q9NSG2 853 aa20■□□□□ 0.79
CAPRIN1-217ENST00000534825 A0A087WWV3 80 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 DENND3A2RUS2 1198 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 OR52Z1P0C646 297 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 FGFR4P22455 802 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 BMPR1AP36894 532 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 RFC5P40937 340 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 TECP42680 631 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 XKR9Q5GH70 373 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 CATSPER3Q86XQ3 398 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 RHPN2Q8IUC4 686 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 EXOC8Q8IYI6 725 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 FBXO22Q8NEZ5 403 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 NEK9Q8TD19 979 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 PRPF31Q8WWY3 499 aaKnown RBP19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 NLRP7Q8WX94 980 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 SLC7A3Q8WY07 619 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 TMEM143Q96AN5 459 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 GCOM2Q9BZD3 368 aaPredicted RBP19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 ANKEF1Q9NU02 776 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 KIF3AQ9Y496 699 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 PCDHB7Q9Y5E2 793 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 COL4A6Q14031 1691 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 ADGRA3Q8IWK6 1321 aa19.99■□□□□ 0.79
CAPRIN1-217ENST00000534825 H3BNC9 293 aa19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 XRCC6P12956 609 aaKnown RBP eCLIP19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 GATMP50440 423 aa19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 BTG3Q14201 252 aaPredicted RBP19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 ZNF410Q86VK4 478 aa19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 MICALL1Q8N3F8 863 aa19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 IFT122Q9HBG6 1241 aa19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 XPNPEP1Q9NQW7 623 aa19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 NOL7Q9UMY1 257 aaKnown RBP19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 PCDHB6Q9Y5E3 794 aa19.98■□□□□ 0.79
CAPRIN1-217ENST00000534825 C5orf67F2Z3F1 127 aa19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 MED24O75448 989 aa19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 POLGP54098 1239 aaPredicted RBP19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 FAM102BQ5T8I3 360 aa19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 CMTR2Q8IYT2 770 aaKnown RBP19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 PIGOQ8TEQ8 1089 aa19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 POLR3CQ9BUI4 534 aaPredicted RBP19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 ELAC1Q9H777 363 aaKnown RBP19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 TUFT1Q9NNX1 390 aa19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 LRFN2Q9ULH4 789 aa19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 SMC3Q9UQE7 1217 aa19.97■□□□□ 0.79
CAPRIN1-217ENST00000534825 VCANP13611 3396 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 RB1P06400 928 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 ZSCAN20P17040 1043 aaPredicted RBP19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 RARRES1P49788 294 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 PTGDRQ13258 359 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 GPM6BQ13491 265 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 EMC2Q15006 297 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 SCLT1Q96NL6 688 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 BMP2KQ9NSY1 1161 aaPredicted RBP19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 TMEM161AQ9NX61 479 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 COL4A3BPQ9Y5P4 624 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 MRPL42Q9Y6G3 142 aaKnown RBP19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 REV3LO60673 3130 aa19.96■□□□□ 0.79
CAPRIN1-217ENST00000534825 GAS2O43903 313 aaKnown RBP19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 RPA1P27694 616 aa19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 FXR2P51116 673 aaKnown RBP eCLIP19.95■□□□□ 0.784e-10■■■□□ 16.4
CAPRIN1-217ENST00000534825 LAMTOR4Q0VGL1 99 aa19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 MCTP1Q6DN14 999 aa19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 FERMT3Q86UX7 667 aa19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 TCP11Q8WWU5 503 aa19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 PSPC1Q8WXF1 523 aaKnown RBP19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 SNX21Q969T3 373 aa19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 NLRP4Q96MN2 994 aa19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 INO80BQ9C086 356 aaPredicted RBP19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 CHST12Q9NRB3 414 aa19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
CAPRIN1-217ENST00000534825 A0A0U1RQF3 1178 aa19.94■□□□□ 0.78
CAPRIN1-217ENST00000534825 ASAP2O43150 1006 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms