RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 LMO1P25800 156 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 RAC3P60763 192 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 TUBA3CQ13748 450 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 DALRD3Q5D0E6 543 aaKnown RBP5.02□□□□□ -1.61
USP48-215ENST00000534705 CDCA2Q69YH5 1023 aaPredicted RBP5.02□□□□□ -1.61
USP48-215ENST00000534705 TUBA3EQ6PEY2 450 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 Q6ZSN1 163 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 LRRTM3Q86VH5 581 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 STPG3Q8N7X2 389 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 VOPP1Q96AW1 172 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 NAF1Q96HR8 494 aaKnown RBP5.02□□□□□ -1.61
USP48-215ENST00000534705 WNK4Q96J92 1243 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 BTBD2Q9BX70 525 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 SLC39A2Q9NP94 309 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 GALNT8Q9NY28 637 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 EIF4G3O43432 1585 aaKnown RBP5.02□□□□□ -1.61
USP48-215ENST00000534705 CHD1O14646 1710 aa5.02□□□□□ -1.61
USP48-215ENST00000534705 FAM83GA6ND36 823 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 RASSF10A6NK89 507 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 H7C1D1 291 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 MMEP08473 750 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 C1SP09871 688 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 ACRV1P26436 265 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 HSD3B2P26439 372 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 GLRBP48167 497 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 USP10Q14694 798 aaKnown RBP5.01□□□□□ -1.61
USP48-215ENST00000534705 CFAP100Q494V2 611 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 CATSPEREQ5SY80 951 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 MAMDC4Q6UXC1 1216 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 AHI1Q8N157 1196 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 CACTINQ8WUQ7 758 aaKnown RBP5.01□□□□□ -1.61
USP48-215ENST00000534705 E2F7Q96AV8 911 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 PRRX2Q99811 253 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 FOXB1Q99853 325 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 KATNBL1Q9H079 304 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 ACSS2Q9NR19 701 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 AURKAIP1Q9NWT8 199 aaPredicted RBP5.01□□□□□ -1.61
USP48-215ENST00000534705 SLC30A1Q9Y6M5 507 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 PBRM1Q86U86 1689 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 CUX1P39880 1505 aa5.01□□□□□ -1.61
USP48-215ENST00000534705 PTPDC1A2A3K4 754 aa5□□□□□ -1.61
USP48-215ENST00000534705 CYP17A1P05093 508 aa5□□□□□ -1.61
USP48-215ENST00000534705 POLD1P28340 1107 aa5□□□□□ -1.61
USP48-215ENST00000534705 MC4RP32245 332 aa5□□□□□ -1.61
USP48-215ENST00000534705 ECE1P42892 770 aa5□□□□□ -1.61
USP48-215ENST00000534705 IL13RA1P78552 427 aa5□□□□□ -1.61
USP48-215ENST00000534705 CREB3L3Q68CJ9 461 aa5□□□□□ -1.61
USP48-215ENST00000534705 NME9Q86XW9 330 aa5□□□□□ -1.61
USP48-215ENST00000534705 IL17DQ8TAD2 202 aa5□□□□□ -1.61
USP48-215ENST00000534705 ZNF483Q8TF39 744 aaPredicted RBP5□□□□□ -1.61
USP48-215ENST00000534705 GBP4Q96PP9 640 aa5□□□□□ -1.61
USP48-215ENST00000534705 TACO1Q9BSH4 297 aaKnown RBP5□□□□□ -1.61
USP48-215ENST00000534705 OR10A5Q9H207 317 aa5□□□□□ -1.61
USP48-215ENST00000534705 PCIF1Q9H4Z3 704 aa5□□□□□ -1.61
USP48-215ENST00000534705 DMRT1Q9Y5R6 373 aa5□□□□□ -1.61
USP48-215ENST00000534705 ABCC8Q09428 1581 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 GOLGA6L22H0YM25 854 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 DVL2O14641 736 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 F2P00734 622 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 CR2P20023 1033 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 ETV4P43268 484 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 DSG1Q02413 1049 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 TOP3AQ13472 1001 aaPredicted RBP4.99□□□□□ -1.61
USP48-215ENST00000534705 TMEM132BQ14DG7 1078 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 EPHA7Q15375 998 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 ZNF174Q15697 407 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 PHF19Q5T6S3 580 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 KANK2Q63ZY3 851 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 SDE2Q6IQ49 451 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 GIMAP6Q6P9H5 292 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 GPR155Q7Z3F1 870 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 RTN4RL1Q86UN2 441 aaPredicted RBP4.99□□□□□ -1.61
USP48-215ENST00000534705 KIAA1958Q8N8K9 716 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 HIPK4Q8NE63 616 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 CALML6Q8TD86 181 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 LARP4BQ92615 738 aaKnown RBP4.99□□□□□ -1.61
USP48-215ENST00000534705 FOXRED1Q96CU9 486 aaPredicted RBP4.99□□□□□ -1.61
USP48-215ENST00000534705 AMNQ9BXJ7 453 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 CARD11Q9BXL7 1154 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 TMX1Q9H3N1 280 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 MMRN2Q9H8L6 949 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 SPO11Q9Y5K1 396 aa4.99□□□□□ -1.61
USP48-215ENST00000534705 ZNF608Q9ULD9 1512 aaPredicted RBP4.98□□□□□ -1.61
USP48-215ENST00000534705 GSG1L2A8MUP6 293 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 GAS7O60861 476 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 RAMP2O60895 175 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 KIF11P52732 1056 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 ALDH6A1Q02252 535 aaKnown RBP4.98□□□□□ -1.61
USP48-215ENST00000534705 WDR72Q3MJ13 1102 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 LRCH2Q5VUJ6 765 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 TMEM200BQ69YZ2 307 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 EFHBQ8N7U6 833 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 SCYL1Q96KG9 808 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 AGAP2Q99490 1192 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 TARS2Q9BW92 718 aaKnown RBP4.98□□□□□ -1.61
USP48-215ENST00000534705 MTFR1LQ9H019 292 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 ZNF703Q9H7S9 590 aaPredicted RBP4.98□□□□□ -1.61
USP48-215ENST00000534705 MSL2Q9HCI7 577 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 OAZ3Q9UMX2 235 aa4.98□□□□□ -1.61
USP48-215ENST00000534705 MAPRE3Q9UPY8 281 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms