RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 CALCOCO2Q13137 446 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 TMEM119Q4V9L6 283 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 ZNF572Q7Z3I7 529 aaPredicted RBP7.4□□□□□ -1.22
RAG1-203ENST00000534663 SYN2Q92777 582 aaPredicted RBP7.4□□□□□ -1.22
RAG1-203ENST00000534663 ARHGEF1Q92888 912 aaKnown RBP7.4□□□□□ -1.22
RAG1-203ENST00000534663 SGSM3Q96HU1 749 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 BTBD6Q96KE9 485 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 RIOX1Q9H6W3 641 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 ACTR5Q9H9F9 607 aaPredicted RBP7.4□□□□□ -1.22
RAG1-203ENST00000534663 ERVK-5Q9HDB9 667 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 PARP4Q9UKK3 1724 aaKnown RBP7.4□□□□□ -1.22
RAG1-203ENST00000534663 CCDC169A6NNP5 214 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 FERP16591 822 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 ELF1P32519 619 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 LONRF1Q17RB8 773 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 ZCWPW2Q504Y3 356 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 ODR4Q5SWX8 454 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 SWT1Q5T5J6 900 aaKnown RBP7.4□□□□□ -1.22
RAG1-203ENST00000534663 SEL1L2Q5TEA6 688 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 NUGGCQ68CJ6 796 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 FAM178BQ8IXR5 827 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 MREGQ8N565 214 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 ARHGEF26Q96DR7 871 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 FAM118BQ9BPY3 351 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 LBHD1Q9BQE6 289 aaPredicted RBP7.4□□□□□ -1.22
RAG1-203ENST00000534663 RUSC1Q9BVN2 902 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 UBE2TQ9NPD8 197 aaPredicted RBP7.4□□□□□ -1.22
RAG1-203ENST00000534663 ACP6Q9NPH0 428 aa7.4□□□□□ -1.22
RAG1-203ENST00000534663 ABCB11O95342 1321 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 TIAM2Q8IVF5 1701 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 RBAK-RBAKDNI3L0D1 243 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 RASGRF2O14827 1237 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 GIT2Q14161 759 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 ARSHQ5FYA8 562 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 SLFN13Q68D06 897 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 LRIG3Q6UXM1 1119 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 NT5DC3Q86UY8 548 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 PALB2Q86YC2 1186 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 BANK1Q8NDB2 785 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 ACTRT1Q8TDG2 376 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 SCFD2Q8WU76 684 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 TAOK3Q9H2K8 898 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 KCTD10Q9H3F6 313 aa7.4□□□□□ -1.23
RAG1-203ENST00000534663 MARCKSL1P49006 195 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 GRAPQ13588 217 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 GRIPAP1Q4V328 841 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 JAMLQ86YT9 394 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 KIAA0825Q8IV33 1275 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 CCDC50Q8IVM0 306 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 CD302Q8IX05 232 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 PPM1KQ8N3J5 372 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 GRAPLQ8TC17 118 aaPredicted RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 CCDC127Q96BQ5 260 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 NAP1L3Q99457 506 aaPredicted RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 SLITRK6Q9H5Y7 841 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 NARFQ9UHQ1 456 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 DAGLAQ9Y4D2 1042 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 COL4A1P02462 1669 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 IGSF9BQ9UPX0 1349 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 FTLP02792 175 aaPredicted RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 ECHS1P30084 290 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 PSMC2P35998 433 aaKnown RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 GCLMP48507 274 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 SEPT2Q15019 361 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 TNIP1Q15025 636 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 KIAA1755Q5JYT7 1200 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 HP1BP3Q5SSJ5 553 aaPredicted RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 TRAPPC3LQ5T215 181 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 C10orf76Q5T2E6 689 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 UBAP2Q5T6F2 1119 aaKnown RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 CCDC174Q6PII3 467 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 CCDC137Q6PK04 289 aaKnown RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 FAM47EQ6ZV65 393 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 UBL4BQ8N7F7 174 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 KCNV2Q8TDN2 545 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 MICAL1Q8TDZ2 1067 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 SLC20A1Q8WUM9 679 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 C1orf54Q8WWF1 131 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 RFFLQ8WZ73 363 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 KRT35Q92764 455 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 SLC35C1Q96A29 364 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 RSRC1Q96IZ7 334 aaKnown RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 C8orf37Q96NL8 207 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 ERP44Q9BS26 406 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 ZC3H12CQ9C0D7 883 aaKnown RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 NSRP1Q9H0G5 558 aaKnown RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 METTL14Q9HCE5 456 aaKnown RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 FGFR1OP2Q9NVK5 253 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 SLC12A6Q9UHW9 1150 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 CEP83Q9Y592 693 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 ALG6Q9Y672 507 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 PHLPP1O60346 1717 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 ESYT2A0FGR8 921 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 GOLGA8IPA6NC78 632 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 GOLGA8JA6NMD2 632 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 GCFC2P16383 781 aaKnown RBP7.39□□□□□ -1.23
RAG1-203ENST00000534663 LMNB1P20700 586 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 SOX5P35711 763 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 PPP4CP60510 307 aa7.39□□□□□ -1.23
RAG1-203ENST00000534663 MYL7Q01449 175 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms