RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 FAM89AQ96GI7 184 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 PTPN18Q99952 460 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 FANCIQ9NVI1 1328 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 PTPN22Q9Y2R2 807 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 GAPVD1Q14C86 1478 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 UBA6A0AVT1 1052 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-219ENST00000534049 CDC14BO60729 498 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 H2AFYO75367 372 aaKnown RBP5.6□□□□□ -1.51
ITGB1-219ENST00000534049 JMJD7P0C870 316 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 CDK11BP21127 795 aaKnown RBP5.6□□□□□ -1.51
ITGB1-219ENST00000534049 ZNF585AQ6P3V2 769 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 KLHDC10Q6PID8 442 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 FILIP1Q7Z7B0 1213 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 KIAA1958Q8N8K9 716 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 RPGRQ92834 1020 aaKnown RBP5.6□□□□□ -1.51
ITGB1-219ENST00000534049 EDAQ92838 391 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 ERCC4Q92889 916 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-219ENST00000534049 FOXRED1Q96CU9 486 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-219ENST00000534049 MAML3Q96JK9 1138 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 GNRHR2Q96P88 292 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 C12orf65Q9H3J6 166 aaKnown RBP5.6□□□□□ -1.51
ITGB1-219ENST00000534049 CDC42EP3Q9UKI2 254 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 ZKSCAN5Q9Y2L8 839 aa5.6□□□□□ -1.51
ITGB1-219ENST00000534049 CEP170Q5SW79 1584 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 TRAF5O00463 557 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 PPP1R12AO14974 1030 aaPredicted RBP5.59□□□□□ -1.51
ITGB1-219ENST00000534049 MATN3O15232 486 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 FOXS1O43638 330 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 PRLP01236 227 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 BCAR1P56945 870 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 ZNF460Q14592 562 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 DGKDQ16760 1214 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 CDCA2Q69YH5 1023 aaPredicted RBP5.59□□□□□ -1.51
ITGB1-219ENST00000534049 SLFN12LQ6IEE8 588 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 LARP4Q71RC2 724 aaKnown RBP eCLIP5.59□□□□□ -1.51
ITGB1-219ENST00000534049 SH3RF3Q8TEJ3 882 aaPredicted RBP5.59□□□□□ -1.51
ITGB1-219ENST00000534049 KIAA1683Q9H0B3 1180 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 KCMF1Q9P0J7 381 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 SAE1Q9UBE0 346 aaPredicted RBP5.59□□□□□ -1.51
ITGB1-219ENST00000534049 FAM184BQ9ULE4 1060 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 PLAAQ9Y263 795 aa5.59□□□□□ -1.51
ITGB1-219ENST00000534049 ERCC6L2Q5T890 1561 aa5.59□□□□□ -1.52
ITGB1-219ENST00000534049 GRIN2AQ12879 1464 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 NUP160Q12769 1436 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 SLC26A4O43511 780 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 GAS7O60861 476 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 POU3F2P20265 443 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-219ENST00000534049 SLC6A3Q01959 620 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 R3HDM1Q15032 1099 aaKnown RBP5.58□□□□□ -1.52
ITGB1-219ENST00000534049 CDSNQ15517 529 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 TIGD7Q6NT04 549 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-219ENST00000534049 ADGRE4PQ86SQ3 457 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 PASD1Q8IV76 773 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 FUKQ8N0W3 1084 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 PPM1KQ8N3J5 372 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 NINJ1Q92982 152 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 C16orf92Q96LL3 132 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 RNPC3Q96LT9 517 aaKnown RBP5.58□□□□□ -1.52
ITGB1-219ENST00000534049 WWC2-AS2Q96NR7 200 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 DPYSL5Q9BPU6 564 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 CHMP4AQ9BY43 222 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 SYNPO2Q9UMS6 1093 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 SPO11Q9Y5K1 396 aa5.58□□□□□ -1.52
ITGB1-219ENST00000534049 WRNQ14191 1432 aaPredicted RBP eCLIP5.57□□□□□ -1.52
ITGB1-219ENST00000534049 SHROOM2Q13796 1616 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 CDC45O75419 566 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 SDSP20132 328 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 OCRLQ01968 901 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 HHEXQ03014 270 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 HGFACQ04756 655 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 USP51Q70EK9 711 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 BMP8AQ7Z5Y6 402 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 PHYKPLQ8IUZ5 450 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 AHI1Q8N157 1196 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 C7orf31Q8N865 590 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 OR5AN1Q8NGI8 311 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 CFHR4Q92496 578 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 CCDC136Q96JN2 1154 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 OR14A2Q96R54 314 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 ADOQ96SZ5 270 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 FEZ1Q99689 392 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 PLA2G12BQ9BX93 195 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 PIF1Q9H611 641 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 IFT57Q9NWB7 429 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 AURKAIP1Q9NWT8 199 aaPredicted RBP5.57□□□□□ -1.52
ITGB1-219ENST00000534049 RUSC2Q8N2Y8 1516 aa5.57□□□□□ -1.52
ITGB1-219ENST00000534049 MATN2O00339 956 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 DVL2O14641 736 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 CYP27B1O15528 508 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 STAT5BP51692 787 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 ZXDAP98168 799 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 DUSP8Q13202 625 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 PRAMEF9Q5VWM5 478 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 PALM2Q8IXS6 379 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 EFHBQ8N7U6 833 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 SHCBP1Q8NEM2 672 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 RABGGTAQ92696 567 aa5.56□□□□□ -1.52
ITGB1-219ENST00000534049 GCDHQ92947 438 aaPredicted RBP5.56□□□□□ -1.52
ITGB1-219ENST00000534049 SLC7A6OSQ96CW6 309 aaPredicted RBP5.56□□□□□ -1.52
ITGB1-219ENST00000534049 NAP1L5Q96NT1 182 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms