RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 VTNP04004 478 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 ATP4AP20648 1035 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 CA8P35219 290 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 METAP2P50579 478 aaKnown RBP eCLIP14.05□□□□□ -0.16
SVIP-205ENST00000533774 ECHDC2Q86YB7 292 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 BCL7CQ8WUZ0 217 aaPredicted RBP14.05□□□□□ -0.16
SVIP-205ENST00000533774 MYL10Q9BUA6 226 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 SPZ1Q9BXG8 430 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 LNPKQ9C0E8 428 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 DZANK1Q9NVP4 752 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 DLGAP2Q9P1A6 1054 aa14.05□□□□□ -0.16
SVIP-205ENST00000533774 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.04□□□□□ -0.16
SVIP-205ENST00000533774 CFHP08603 1231 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 SP9P0CG40 484 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
SVIP-205ENST00000533774 CRYBB1P53674 252 aaPredicted RBP14.04□□□□□ -0.16
SVIP-205ENST00000533774 BCAR1P56945 870 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 ANTXR2P58335 489 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 GPR149Q86SP6 731 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 ZNF598Q86UK7 904 aaKnown RBP14.04□□□□□ -0.16
SVIP-205ENST00000533774 VPS52Q8N1B4 723 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 SUMF1Q8NBK3 374 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 HELQQ8TDG4 1101 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 VN1R3Q9BXE9 311 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 PSTPIP2Q9H939 334 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 PCDHA6Q9UN73 950 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 PCDHA8Q9Y5H6 950 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 NFASCO94856 1347 aa14.04□□□□□ -0.16
SVIP-205ENST00000533774 hCG_1642624A0A1W2PR95 340 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 POTEMA6NI47 508 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 MAFGO15525 162 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 HBP1O60381 514 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 PLEKHA8P1O95397 391 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 C22orf31O95567 290 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 DCNP07585 359 aaKnown RBP14.03□□□□□ -0.16
SVIP-205ENST00000533774 WTAPQ15007 396 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 ODR4Q5SWX8 454 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 POTEGQ6S5H5 508 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 ABHD15Q6UXT9 468 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 FAM43BQ6ZT52 329 aaPredicted RBP14.03□□□□□ -0.16
SVIP-205ENST00000533774 CCDC60Q8IWA6 550 aaPredicted RBP14.03□□□□□ -0.16
SVIP-205ENST00000533774 PLEKHM2Q8IWE5 1019 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 CMTR1Q8N1G2 835 aaKnown RBP14.03□□□□□ -0.16
SVIP-205ENST00000533774 SRBD1Q8N5C6 995 aaKnown RBP14.03□□□□□ -0.16
SVIP-205ENST00000533774 RNF169Q8NCN4 708 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 RUBCNQ92622 972 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 ACSF2Q96CM8 615 aaPredicted RBP14.03□□□□□ -0.16
SVIP-205ENST00000533774 RRP36Q96EU6 259 aaKnown RBP14.03□□□□□ -0.16
SVIP-205ENST00000533774 HINFPQ9BQA5 517 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 MXRA8Q9BRK3 442 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 DIAPH3Q9NSV4 1193 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 CA14Q9ULX7 337 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 IRAK3Q9Y616 596 aa14.03□□□□□ -0.16
SVIP-205ENST00000533774 BAHCC1Q9P281 2608 aa14.02□□□□□ -0.16
SVIP-205ENST00000533774 COL1A2P08123 1366 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 STK25O00506 426 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 HOXA2O43364 376 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 GLULP15104 373 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 SPECC1Q5M775 1068 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 CCDC149Q6ZUS6 474 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 OTOP3Q7RTS5 596 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 CABP7Q86V35 215 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 MAML2Q8IZL2 1156 aaPredicted RBP14.02□□□□□ -0.17
SVIP-205ENST00000533774 IGDCC4Q8TDY8 1250 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 BBXQ8WY36 941 aaPredicted RBP14.02□□□□□ -0.17
SVIP-205ENST00000533774 TNPO1Q92973 898 aaKnown RBP14.02□□□□□ -0.17
SVIP-205ENST00000533774 PGBD1Q96JS3 809 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 ZNF668Q96K58 619 aaPredicted RBP14.02□□□□□ -0.17
SVIP-205ENST00000533774 ADAMTS10Q9H324 1103 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 TBC1D17Q9HA65 648 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 AGO4Q9HCK5 861 aaKnown RBP14.02□□□□□ -0.17
SVIP-205ENST00000533774 WNT16Q9UBV4 365 aa14.02□□□□□ -0.17
SVIP-205ENST00000533774 DDX39AO00148 427 aaKnown RBP14.01□□□□□ -0.17
SVIP-205ENST00000533774 B4GALT3O60512 393 aa14.01□□□□□ -0.17
SVIP-205ENST00000533774 CYP21A2P08686 494 aa14.01□□□□□ -0.17
SVIP-205ENST00000533774 CTSAP10619 480 aa14.01□□□□□ -0.17
SVIP-205ENST00000533774 FGFR4P22455 802 aa14.01□□□□□ -0.17
SVIP-205ENST00000533774 CLCN3P51790 818 aa14.01□□□□□ -0.17
SVIP-205ENST00000533774 ZNF484Q5JVG2 852 aa14.01□□□□□ -0.17
SVIP-205ENST00000533774 ABI1Q8IZP0 508 aa14.01□□□□□ -0.17
SVIP-205ENST00000533774 HS6ST3Q8IZP7 471 aa14.01□□□□□ -0.17
SVIP-205ENST00000533774 SDF4Q9BRK5 362 aa14.01□□□□□ -0.17
SVIP-205ENST00000533774 LRRN2O75325 713 aa14□□□□□ -0.17
SVIP-205ENST00000533774 SLC26A2P50443 739 aa14□□□□□ -0.17
SVIP-205ENST00000533774 ATXN1P54253 815 aaKnown RBP14□□□□□ -0.17
SVIP-205ENST00000533774 NLRP11P59045 1033 aaKnown RBP14□□□□□ -0.17
SVIP-205ENST00000533774 TBC1D8BQ0IIM8 1120 aa14□□□□□ -0.17
SVIP-205ENST00000533774 COL9A3Q14050 684 aaPredicted RBP14□□□□□ -0.17
SVIP-205ENST00000533774 PTPN14Q15678 1187 aa14□□□□□ -0.17
SVIP-205ENST00000533774 LETM2Q2VYF4 491 aa14□□□□□ -0.17
SVIP-205ENST00000533774 CATIPQ7Z7H3 387 aa14□□□□□ -0.17
SVIP-205ENST00000533774 DDX53Q86TM3 631 aaKnown RBP14□□□□□ -0.17
SVIP-205ENST00000533774 ZNF654Q8IZM8 581 aa14□□□□□ -0.17
SVIP-205ENST00000533774 SLC44A3Q8N4M1 653 aa14□□□□□ -0.17
SVIP-205ENST00000533774 LINC01465Q8N7H1 131 aa14□□□□□ -0.17
SVIP-205ENST00000533774 TMEM169Q96HH4 297 aa14□□□□□ -0.17
SVIP-205ENST00000533774 IGSF21Q96ID5 467 aa14□□□□□ -0.17
SVIP-205ENST00000533774 SFXN1Q9H9B4 322 aa14□□□□□ -0.17
SVIP-205ENST00000533774 IGSF9Q9P2J2 1179 aa14□□□□□ -0.17
SVIP-205ENST00000533774 RALGAPA1Q6GYQ0 2036 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms