RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 FAN1Q9Y2M0 1017 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 UBIAD1Q9Y5Z9 338 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 DKC1O60832 514 aaKnown RBP eCLIP13.03□□□□□ -0.32
ATM-222ENST00000533733 RNF40O75150 1001 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 ARP10275 920 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 ACTN1P12814 892 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 SFNP31947 248 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 ABCD1P33897 745 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 ENPEPQ07075 957 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 BFSP1Q12934 665 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 PPFIA1Q13136 1202 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 SYCP3Q8IZU3 236 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 MREGQ8N565 214 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
ATM-222ENST00000533733 WHAMMQ8TF30 809 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 SUCLA2Q9P2R7 463 aaPredicted RBP13.03□□□□□ -0.32
ATM-222ENST00000533733 APEX2Q9UBZ4 518 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 TMEM59LQ9UK28 342 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 NCANO14594 1321 aa13.03□□□□□ -0.32
ATM-222ENST00000533733 ZC3H4Q9UPT8 1303 aaKnown RBP13.03□□□□□ -0.32
ATM-222ENST00000533733 F8VZ95 297 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 TULP1O00294 542 aaPredicted RBP13.02□□□□□ -0.32
ATM-222ENST00000533733 NCK2O43639 380 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 SYF2O95926 243 aaKnown RBP13.02□□□□□ -0.32
ATM-222ENST00000533733 TMEM253P0C7T8 217 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 RPS12P25398 132 aaKnown RBP13.02□□□□□ -0.32
ATM-222ENST00000533733 QARSP47897 775 aaKnown RBP13.02□□□□□ -0.32
ATM-222ENST00000533733 LMAN1P49257 510 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 JAK3P52333 1124 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 PADI6Q6TGC4 694 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 LRRC57Q8N9N7 239 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 TPCN2Q8NHX9 752 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 RUFY1Q96T51 708 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 TMEM39BQ9GZU3 492 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 KCNH7Q9NS40 1196 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 RBM12Q9NTZ6 932 aaKnown RBP13.02□□□□□ -0.32
ATM-222ENST00000533733 DMGDHQ9UI17 866 aaKnown RBP13.02□□□□□ -0.32
ATM-222ENST00000533733 USP20Q9Y2K6 914 aa13.02□□□□□ -0.32
ATM-222ENST00000533733 MAFGO15525 162 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 EXOC3O60645 756 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 CTNND1O60716 968 aaKnown RBP13.02□□□□□ -0.33
ATM-222ENST00000533733 HSF2BPO75031 334 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 HIP1RO75146 1068 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 CXCR5P32302 372 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
ATM-222ENST00000533733 MYL7Q01449 175 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 TCEAL1Q15170 157 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 C4orf19Q8IY42 314 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 C1orf131Q8NDD1 294 aaKnown RBP13.02□□□□□ -0.33
ATM-222ENST00000533733 SLC30A5Q8TAD4 765 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 HOOK2Q96ED9 719 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 CCDC43Q96MW1 224 aaKnown RBP13.02□□□□□ -0.33
ATM-222ENST00000533733 SLC38A10Q9HBR0 1119 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 AGO4Q9HCK5 861 aaKnown RBP13.02□□□□□ -0.33
ATM-222ENST00000533733 ANKEF1Q9NU02 776 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 TTC7AQ9ULT0 858 aaPredicted RBP13.02□□□□□ -0.33
ATM-222ENST00000533733 EXOC7Q9UPT5 735 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 PFASO15067 1338 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 ZNF536O15090 1300 aa13.02□□□□□ -0.33
ATM-222ENST00000533733 COL4A5P29400 1685 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 ARID2Q68CP9 1835 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 ERICH4A6NGS2 130 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 K7ENM7 598 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 PGRMC1O00264 195 aaKnown RBP13.01□□□□□ -0.33
ATM-222ENST00000533733 EVI5O60447 810 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 FTCDO95954 541 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 PLS3P13797 630 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 HADHBP55084 474 aaKnown RBP13.01□□□□□ -0.33
ATM-222ENST00000533733 KRT76Q01546 638 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 KCNA1Q09470 495 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 MAPK7Q13164 816 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 CUL1Q13616 776 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 ZSCAN26Q16670 478 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 TKFCQ3LXA3 575 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 CIAPIN1Q6FI81 312 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 SND1Q7KZF4 910 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATM-222ENST00000533733 PEX26Q7Z412 305 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 USP37Q86T82 979 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 RASGEF1CQ8N431 466 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 RFFLQ8WZ73 363 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 NAP1L3Q99457 506 aaPredicted RBP13.01□□□□□ -0.33
ATM-222ENST00000533733 SH3GL2Q99962 352 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 ZNF341Q9BYN7 854 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 INTS2Q9H0H0 1204 aaKnown RBP13.01□□□□□ -0.33
ATM-222ENST00000533733 FAM204AQ9H8W3 233 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 C17orf75Q9HAS0 396 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 DNAJC12Q9UKB3 198 aa13.01□□□□□ -0.33
ATM-222ENST00000533733 CTDP1Q9Y5B0 961 aaPredicted RBP13.01□□□□□ -0.33
ATM-222ENST00000533733 BRCA1P38398 1863 aaKnown RBP13□□□□□ -0.33
ATM-222ENST00000533733 SFI1A8K8P3 1242 aa13□□□□□ -0.33
ATM-222ENST00000533733 WNT10BO00744 389 aa13□□□□□ -0.33
ATM-222ENST00000533733 DHX15O43143 795 aaKnown RBP13□□□□□ -0.33
ATM-222ENST00000533733 ZBED4O75132 1171 aa13□□□□□ -0.33
ATM-222ENST00000533733 HEXIM1O94992 359 aaKnown RBP13□□□□□ -0.33
ATM-222ENST00000533733 MYBL2P10244 700 aa13□□□□□ -0.33
ATM-222ENST00000533733 TAL1P17542 331 aaPredicted RBP13□□□□□ -0.33
ATM-222ENST00000533733 CAPN2P17655 700 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms