RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 TMEM150BA6NC51 233 aa17.33■□□□□ 0.36
CPSF1-211ENST00000533492 EML1O00423 815 aa17.33■□□□□ 0.36
CPSF1-211ENST00000533492 STBD1O95210 358 aa17.33■□□□□ 0.36
CPSF1-211ENST00000533492 P4HBP07237 508 aaKnown RBP17.33■□□□□ 0.36
CPSF1-211ENST00000533492 DARSP14868 501 aaKnown RBP17.33■□□□□ 0.36
CPSF1-211ENST00000533492 FAM189BP81408 668 aa17.33■□□□□ 0.36
CPSF1-211ENST00000533492 NR5A1Q13285 461 aa17.33■□□□□ 0.36
CPSF1-211ENST00000533492 DSC3Q14574 896 aa17.33■□□□□ 0.36
CPSF1-211ENST00000533492 KLHL23Q8NBE8 558 aa17.33■□□□□ 0.36
CPSF1-211ENST00000533492 NSUN7Q8NE18 718 aaKnown RBP17.33■□□□□ 0.36
CPSF1-211ENST00000533492 PABPC5Q96DU9 382 aaKnown RBP17.33■□□□□ 0.36
CPSF1-211ENST00000533492 JPH2Q9BR39 696 aaPredicted RBP17.33■□□□□ 0.36
CPSF1-211ENST00000533492 GCOM2Q9BZD3 368 aaPredicted RBP17.33■□□□□ 0.36
CPSF1-211ENST00000533492 ELAC1Q9H777 363 aaKnown RBP17.33■□□□□ 0.36
CPSF1-211ENST00000533492 CLDND1Q9NY35 253 aa17.33■□□□□ 0.36
CPSF1-211ENST00000533492 PCDHB12Q9Y5F1 795 aa17.33■□□□□ 0.36
CPSF1-211ENST00000533492 MMP1P03956 469 aa17.32■□□□□ 0.36
CPSF1-211ENST00000533492 FOSBP53539 338 aa17.32■□□□□ 0.36
CPSF1-211ENST00000533492 DRP2Q13474 957 aa17.32■□□□□ 0.36
CPSF1-211ENST00000533492 EARS2Q5JPH6 523 aaKnown RBP17.32■□□□□ 0.36
CPSF1-211ENST00000533492 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
CPSF1-211ENST00000533492 SLFN12Q8IYM2 578 aa17.32■□□□□ 0.36
CPSF1-211ENST00000533492 SPPL3Q8TCT6 385 aa17.32■□□□□ 0.36
CPSF1-211ENST00000533492 PPP2R3CQ969Q6 453 aa17.32■□□□□ 0.36
CPSF1-211ENST00000533492 SUCLA2Q9P2R7 463 aaPredicted RBP17.32■□□□□ 0.36
CPSF1-211ENST00000533492 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
CPSF1-211ENST00000533492 IGKV6-21A0A0C4DH24 114 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 H3BQ06 376 aaPredicted RBP17.31■□□□□ 0.36
CPSF1-211ENST00000533492 HOXA2O43364 376 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 JAK2O60674 1132 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 MAFO75444 373 aaPredicted RBP17.31■□□□□ 0.36
CPSF1-211ENST00000533492 ITGB1P05556 798 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 FGFR4P22455 802 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 EPHA7Q15375 998 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 PUS10Q3MIT2 529 aaKnown RBP17.31■□□□□ 0.36
CPSF1-211ENST00000533492 PLA2G4FQ68DD2 849 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 NCAPH2Q6IBW4 605 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 PTCRAQ6ISU1 281 aaPredicted RBP17.31■□□□□ 0.36
CPSF1-211ENST00000533492 ANO5Q75V66 913 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 RHPN2Q8IUC4 686 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 EXOC8Q8IYI6 725 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 ABI1Q8IZP0 508 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.31■□□□□ 0.36
CPSF1-211ENST00000533492 NEK9Q8TD19 979 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 HAS1Q92839 578 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 CEP170P1Q96L14 293 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 CEP89Q96ST8 783 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 INO80BQ9C086 356 aaPredicted RBP17.31■□□□□ 0.36
CPSF1-211ENST00000533492 IGFLR1Q9H665 355 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 CYP26B1Q9NR63 512 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 DACT1Q9NYF0 836 aa17.31■□□□□ 0.36
CPSF1-211ENST00000533492 A0A087WZ62 844 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 FAM205CA6NFA0 338 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 BTBD18B2RXH4 712 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 CSDE1O75534 798 aaKnown RBP17.3■□□□□ 0.36
CPSF1-211ENST00000533492 FGFR1P11362 822 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 OTUD6AQ7L8S5 288 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 DIS3L2Q8IYB7 885 aaKnown RBP17.3■□□□□ 0.36
CPSF1-211ENST00000533492 RNF169Q8NCN4 708 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 POF1BQ8WVV4 589 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 SLC7A3Q8WY07 619 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 TNFRSF25Q93038 417 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 FDXACB1Q9BRP7 624 aaPredicted RBP17.3■□□□□ 0.36
CPSF1-211ENST00000533492 TMEM117Q9H0C3 514 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 TYW1Q9NV66 732 aaKnown RBP17.3■□□□□ 0.36
CPSF1-211ENST00000533492 LIMCH1Q9UPQ0 1083 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 FAM50BQ9Y247 325 aa17.3■□□□□ 0.36
CPSF1-211ENST00000533492 FNDC1Q4ZHG4 1894 aaPredicted RBP17.3■□□□□ 0.36
CPSF1-211ENST00000533492 SFPQP23246 707 aaKnown RBP eCLIP17.29■□□□□ 0.36
CPSF1-211ENST00000533492 POLGP54098 1239 aaPredicted RBP17.29■□□□□ 0.36
CPSF1-211ENST00000533492 NPEPPSP55786 919 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 HYAL1Q12794 435 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 CAMK1Q14012 370 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 SAFBQ15424 915 aaKnown RBP eCLIP17.29■□□□□ 0.36
CPSF1-211ENST00000533492 CSPP1Q1MSJ5 1256 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 ZNF410Q86VK4 478 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 ECHDC2Q86YB7 292 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 C4orf19Q8IY42 314 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 THNSL1Q8IYQ7 743 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 MICAL1Q8TDZ2 1067 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 LXNQ9BS40 222 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 ZSWIM4Q9H7M6 989 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 RGL1Q9NZL6 768 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 PCDHA12Q9UN75 941 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 PPME1Q9Y570 386 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 BDP1A6H8Y1 2624 aa17.29■□□□□ 0.36
CPSF1-211ENST00000533492 A0A0U1RQF3 1178 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 GRXCR2A6NFK2 248 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 IL9P15248 144 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 LAG3P18627 525 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 DNAJB1P25685 340 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 UBE3AQ05086 875 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 COL19A1Q14993 1142 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 CALCRLQ16602 461 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 TPH2Q8IWU9 490 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 DYDC2Q96IM9 177 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 NLRP4Q96MN2 994 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 CHST12Q9NRB3 414 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 KIAA1671Q9BY89 1806 aa17.28■□□□□ 0.36
CPSF1-211ENST00000533492 EOMESO95936 686 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms