RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 GCOM2Q9BZD3 368 aaPredicted RBP23.32■■□□□ 1.32
VPS51-211ENST00000533487 ADAMTS10Q9H324 1103 aa23.32■■□□□ 1.32
VPS51-211ENST00000533487 KCND2Q9NZV8 630 aa23.32■■□□□ 1.32
VPS51-211ENST00000533487 COL4A3BPQ9Y5P4 624 aa23.32■■□□□ 1.32
VPS51-211ENST00000533487 PP2D1A8MPX8 630 aa23.31■■□□□ 1.32
VPS51-211ENST00000533487 RPS6KA5O75582 802 aa23.31■■□□□ 1.32
VPS51-211ENST00000533487 CYP11B2P19099 503 aa23.31■■□□□ 1.32
VPS51-211ENST00000533487 PAK2Q13177 524 aa23.31■■□□□ 1.32
VPS51-211ENST00000533487 KIZQ2M2Z5 673 aa23.31■■□□□ 1.32
VPS51-211ENST00000533487 CCDC39Q9UFE4 941 aa23.31■■□□□ 1.32
VPS51-211ENST00000533487 ZBBXA8MT70 800 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 MARCKSP29966 332 aaPredicted RBP23.3■■□□□ 1.32
VPS51-211ENST00000533487 CEBPZQ03701 1054 aaKnown RBP23.3■■□□□ 1.32
VPS51-211ENST00000533487 TFDP1Q14186 410 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 ECM1Q16610 540 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 TMEM119Q4V9L6 283 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 PADI6Q6TGC4 694 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 RHPN2Q8IUC4 686 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 NLRP7Q8WX94 980 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 SCLT1Q96NL6 688 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 BHMT2Q9H2M3 363 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 XPNPEP1Q9NQW7 623 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 PCDH10Q9P2E7 1040 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 KCNG1Q9UIX4 513 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 PADI3Q9ULW8 664 aa23.3■■□□□ 1.32
VPS51-211ENST00000533487 DARSP14868 501 aaKnown RBP23.29■■□□□ 1.32
VPS51-211ENST00000533487 CDC25AP30304 524 aa23.29■■□□□ 1.32
VPS51-211ENST00000533487 KRT85P78386 507 aa23.29■■□□□ 1.32
VPS51-211ENST00000533487 SRGAP1Q7Z6B7 1085 aa23.29■■□□□ 1.32
VPS51-211ENST00000533487 PRPF31Q8WWY3 499 aaKnown RBP23.29■■□□□ 1.32
VPS51-211ENST00000533487 OSMRQ99650 979 aa23.29■■□□□ 1.32
VPS51-211ENST00000533487 NFKBIZQ9BYH8 718 aa23.29■■□□□ 1.32
VPS51-211ENST00000533487 CSRNP2Q9H175 543 aa23.29■■□□□ 1.32
VPS51-211ENST00000533487 CIZ1Q9ULV3 898 aaPredicted RBP23.29■■□□□ 1.32
VPS51-211ENST00000533487 GINS2Q9Y248 185 aa23.29■■□□□ 1.32
VPS51-211ENST00000533487 ZDHHC9Q9Y397 364 aa23.29■■□□□ 1.32
VPS51-211ENST00000533487 USO1O60763 962 aaKnown RBP23.28■■□□□ 1.32
VPS51-211ENST00000533487 AMHP03971 560 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 SFPQP23246 707 aaKnown RBP eCLIP23.28■■□□□ 1.32
VPS51-211ENST00000533487 DDIT3P35638 169 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 ARL2P36404 184 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 WDR5P61964 334 aaKnown RBP23.28■■□□□ 1.32
VPS51-211ENST00000533487 LAMTOR4Q0VGL1 99 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 GRB10Q13322 594 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 DRP2Q13474 957 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 FOXD4L5Q5VV16 416 aaPredicted RBP23.28■■□□□ 1.32
VPS51-211ENST00000533487 IFNLR1Q8IU57 520 aaPredicted RBP23.28■■□□□ 1.32
VPS51-211ENST00000533487 RASSF8Q8NHQ8 419 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 FOXD4L4Q8WXT5 416 aaPredicted RBP23.28■■□□□ 1.32
VPS51-211ENST00000533487 KIFAP3Q92845 792 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 PNMA5Q96PV4 448 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 AGO3Q9H9G7 860 aaKnown RBP23.28■■□□□ 1.32
VPS51-211ENST00000533487 ERVK-5Q9HDB9 667 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 CXXC1Q9P0U4 656 aaPredicted RBP23.28■■□□□ 1.32
VPS51-211ENST00000533487 TFIP11Q9UBB9 837 aaKnown RBP23.28■■□□□ 1.32
VPS51-211ENST00000533487 RCOR1Q9UKL0 485 aa23.28■■□□□ 1.32
VPS51-211ENST00000533487 RANBP2P49792 3224 aaKnown RBP23.27■■□□□ 1.32
VPS51-211ENST00000533487 CUTAO60888 179 aa23.27■■□□□ 1.32
VPS51-211ENST00000533487 ATP2A2P16615 1042 aaKnown RBP23.27■■□□□ 1.32
VPS51-211ENST00000533487 CD52P31358 61 aa23.27■■□□□ 1.32
VPS51-211ENST00000533487 PPP2R5AQ15172 486 aa23.27■■□□□ 1.32
VPS51-211ENST00000533487 RAB30Q15771 203 aa23.27■■□□□ 1.32
VPS51-211ENST00000533487 SYT2Q8N9I0 419 aaPredicted RBP23.27■■□□□ 1.32
VPS51-211ENST00000533487 TMEM143Q96AN5 459 aa23.27■■□□□ 1.32
VPS51-211ENST00000533487 SCAND2PQ9GZW5 306 aaPredicted RBP23.27■■□□□ 1.32
VPS51-211ENST00000533487 C17orf75Q9HAS0 396 aa23.27■■□□□ 1.32
VPS51-211ENST00000533487 STK17AQ9UEE5 414 aa23.27■■□□□ 1.32
VPS51-211ENST00000533487 NOC2LQ9Y3T9 749 aaKnown RBP23.27■■□□□ 1.32
VPS51-211ENST00000533487 TMEM265A0A087WTH1 108 aa23.26■■□□□ 1.31
VPS51-211ENST00000533487 E9PMD0 336 aa23.26■■□□□ 1.31
VPS51-211ENST00000533487 PHKA2P46019 1235 aa23.26■■□□□ 1.31
VPS51-211ENST00000533487 DNM1Q05193 864 aaKnown RBP23.26■■□□□ 1.31
VPS51-211ENST00000533487 TMEM40Q8WWA1 233 aa23.26■■□□□ 1.31
VPS51-211ENST00000533487 TSPYL2Q9H2G4 693 aaPredicted RBP23.26■■□□□ 1.31
VPS51-211ENST00000533487 CDHR5Q9HBB8 845 aa23.26■■□□□ 1.31
VPS51-211ENST00000533487 CHST12Q9NRB3 414 aa23.26■■□□□ 1.31
VPS51-211ENST00000533487 C1orf112Q9NSG2 853 aa23.26■■□□□ 1.31
VPS51-211ENST00000533487 ST3GAL5Q9UNP4 418 aa23.26■■□□□ 1.31
VPS51-211ENST00000533487 A0A087WZ62 844 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 GUCY2CP25092 1073 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 GRIN1Q05586 938 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 NFX1Q12986 1120 aaKnown RBP23.25■■□□□ 1.31
VPS51-211ENST00000533487 ZRSR1Q15695 479 aaKnown RBP23.25■■□□□ 1.31
VPS51-211ENST00000533487 CCDC73Q6ZRK6 1079 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 FAM228AQ86W67 206 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 SYMPKQ92797 1274 aaKnown RBP23.25■■□□□ 1.31
VPS51-211ENST00000533487 DRC1Q96MC2 740 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 NLRP4Q96MN2 994 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 FDXACB1Q9BRP7 624 aaPredicted RBP23.25■■□□□ 1.31
VPS51-211ENST00000533487 POLR3FQ9H1D9 316 aaPredicted RBP23.25■■□□□ 1.31
VPS51-211ENST00000533487 IFT122Q9HBG6 1241 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 PHLPP2Q6ZVD8 1323 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 TCHHQ07283 1943 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 TTC3P53804 2025 aa23.25■■□□□ 1.31
VPS51-211ENST00000533487 PTPRSQ13332 1948 aa23.24■■□□□ 1.31
VPS51-211ENST00000533487 PTENP60484 403 aa23.24■■□□□ 1.31
VPS51-211ENST00000533487 FAM109BQ6ICB4 259 aaPredicted RBP23.24■■□□□ 1.31
VPS51-211ENST00000533487 RINT1Q6NUQ1 792 aa23.24■■□□□ 1.31
VPS51-211ENST00000533487 RNF149Q8NC42 400 aa23.24■■□□□ 1.31
VPS51-211ENST00000533487 PYM1Q9BRP8 204 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms