RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 CCNE2O96020 404 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 CYP21A2P08686 494 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 CTSAP10619 480 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 ATP4AP20648 1035 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 METAP2P50579 478 aaKnown RBP eCLIP8.89□□□□□ -0.99
NXF1-215ENST00000533440 POLGP54098 1239 aaPredicted RBP8.89□□□□□ -0.99
NXF1-215ENST00000533440 BCAR1P56945 870 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 GIT2Q14161 759 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 SART3Q15020 963 aaKnown RBP8.89□□□□□ -0.99
NXF1-215ENST00000533440 FAM160B1Q5W0V3 765 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 TMC5Q6UXY8 1006 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 CCDC149Q6ZUS6 474 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 CABP7Q86V35 215 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 CCDC60Q8IWA6 550 aaPredicted RBP8.89□□□□□ -0.99
NXF1-215ENST00000533440 VPS52Q8N1B4 723 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 SRBD1Q8N5C6 995 aaKnown RBP8.89□□□□□ -0.99
NXF1-215ENST00000533440 CTCFLQ8NI51 663 aaPredicted RBP8.89□□□□□ -0.99
NXF1-215ENST00000533440 RUBCNQ92622 972 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 TMEM169Q96HH4 297 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 PPP1R16BQ96T49 567 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 SFXN1Q9H9B4 322 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 AGO4Q9HCK5 861 aaKnown RBP8.89□□□□□ -0.99
NXF1-215ENST00000533440 IGSF9Q9P2J2 1179 aa8.89□□□□□ -0.99
NXF1-215ENST00000533440 GPR179Q6PRD1 2367 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 A0A0U1RQF3 1178 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 E7EWF7 191 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 MEIS1O00470 390 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 NARSO43776 548 aaKnown RBP8.88□□□□□ -0.99
NXF1-215ENST00000533440 DDAH1O94760 285 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 PLEKHA8P1O95397 391 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 VTNP04004 478 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 ZSCAN20P17040 1043 aaPredicted RBP8.88□□□□□ -0.99
NXF1-215ENST00000533440 KIF5BP33176 963 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 CA8P35219 290 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 ALDH7A1P49419 539 aaKnown RBP8.88□□□□□ -0.99
NXF1-215ENST00000533440 GNAQP50148 359 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 VASPP50552 380 aaPredicted RBP8.88□□□□□ -0.99
NXF1-215ENST00000533440 ANTXR2P58335 489 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 TBC1D8BQ0IIM8 1120 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 CEP55Q53EZ4 464 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 ZC3H14Q6PJT7 736 aaKnown RBP8.88□□□□□ -0.99
NXF1-215ENST00000533440 C15orf39Q6ZRI6 1047 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 DDX53Q86TM3 631 aaKnown RBP8.88□□□□□ -0.99
NXF1-215ENST00000533440 PPFIBP1Q86W92 1011 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 TMEM173Q86WV6 379 aaPredicted RBP8.88□□□□□ -0.99
NXF1-215ENST00000533440 SMC5Q8IY18 1101 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 ZNF654Q8IZM8 581 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 LINC01465Q8N7H1 131 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 NCOA7Q8NI08 942 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 HELQQ8TDG4 1101 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 AUTS2Q8WXX7 1259 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 MYL10Q9BUA6 226 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 MRPL9Q9BYD2 267 aaKnown RBP8.88□□□□□ -0.99
NXF1-215ENST00000533440 ADAMTS10Q9H324 1103 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 LY9Q9HBG7 655 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 DLGAP2Q9P1A6 1054 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 TAF6LQ9Y6J9 622 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 CFAP47Q6ZTR5 3102 aa8.88□□□□□ -0.99
NXF1-215ENST00000533440 C2orf16Q68DN1 1984 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 CARNS1A5YM72 827 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 BACH1O14867 736 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 DHX15O43143 795 aaKnown RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 N4BP1O75113 896 aaKnown RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 CFHP08603 1231 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 PRR29P0C7W0 189 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 SP9P0CG40 484 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 EIF4BP23588 611 aaKnown RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 NLRP11P59045 1033 aaKnown RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 RSPO4Q2I0M5 234 aaPredicted RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 LETM2Q2VYF4 491 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 PHLDB3Q6NSJ2 640 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 PDXDC2PQ6P474 469 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 RALYLQ86SE5 291 aaKnown RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 TEX2Q8IWB9 1127 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 MB21D2Q8IYB1 491 aaPredicted RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 ZNF710Q8N1W2 664 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 DCLK2Q8N568 766 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 SUMF1Q8NBK3 374 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 TMEM87AQ8NBN3 555 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 RNF169Q8NCN4 708 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 BBXQ8WY36 941 aaPredicted RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 RIN2Q8WYP3 895 aaPredicted RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 RSPH1Q8WYR4 309 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 IGSF21Q96ID5 467 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 RHOBTB2Q9BYZ6 727 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 ZNF302Q9NR11 478 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 MAFBQ9Y5Q3 323 aaPredicted RBP8.87□□□□□ -0.99
NXF1-215ENST00000533440 SPTBN2O15020 2390 aa8.87□□□□□ -0.99
NXF1-215ENST00000533440 STK25O00506 426 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 MAGEB2O15479 319 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 LILRB3O75022 631 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 GALTP07902 379 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 CLCN3P51790 818 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 CLCN4P51793 760 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 PTPN14Q15678 1187 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 SWSAP1Q6NVH7 229 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 MIS18BP1Q6P0N0 1132 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 NIPA1Q7RTP0 329 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 CHD1LQ86WJ1 897 aa8.86□□□□□ -0.99
NXF1-215ENST00000533440 C1orf210Q8IVY1 113 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms