RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 NIFKQ9BYG3 293 aaKnown RBP12.73□□□□□ -0.37
CLCF1-202ENST00000533438 ELAC1Q9H777 363 aaKnown RBP12.73□□□□□ -0.37
CLCF1-202ENST00000533438 KCNMB3Q9NPA1 279 aa12.73□□□□□ -0.37
CLCF1-202ENST00000533438 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
CLCF1-202ENST00000533438 PRKAG3Q9UGI9 489 aa12.73□□□□□ -0.37
CLCF1-202ENST00000533438 DDX25Q9UHL0 483 aaKnown RBP12.73□□□□□ -0.37
CLCF1-202ENST00000533438 ARID2Q68CP9 1835 aa12.73□□□□□ -0.37
CLCF1-202ENST00000533438 IGKV6-21A0A0C4DH24 114 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 H3BQ06 376 aaPredicted RBP12.72□□□□□ -0.37
CLCF1-202ENST00000533438 NCK2O43639 380 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 DTNBO60941 627 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 XBP1P17861 261 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 EIF4BP23588 611 aaKnown RBP12.72□□□□□ -0.37
CLCF1-202ENST00000533438 LTBRP36941 435 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 TBC1D8BQ0IIM8 1120 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 LETM2Q2VYF4 491 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 XKR3Q5GH77 459 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 PPP4R3AQ6IN85 833 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 PTCRAQ6ISU1 281 aaPredicted RBP12.72□□□□□ -0.37
CLCF1-202ENST00000533438 NEK8Q86SG6 692 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 OXER1Q8TDS5 423 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 GJB4Q9NTQ9 266 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 TMEM161AQ9NX61 479 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
CLCF1-202ENST00000533438 CCDC194A0A1B0GVG4 234 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 TMEM150BA6NC51 233 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 TBKBP1A7MCY6 615 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 EML1O00423 815 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 LARGE1O95461 756 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 FDPSP14324 419 aaKnown RBP12.71□□□□□ -0.37
CLCF1-202ENST00000533438 DARSP14868 501 aaKnown RBP12.71□□□□□ -0.37
CLCF1-202ENST00000533438 GCFC2P16383 781 aaKnown RBP12.71□□□□□ -0.37
CLCF1-202ENST00000533438 IBSPP21815 317 aaPredicted RBP12.71□□□□□ -0.37
CLCF1-202ENST00000533438 PPP2R5CQ13362 524 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 DRP2Q13474 957 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 RABEP1Q15276 862 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 ME3Q16798 604 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 MTERF2Q49AM1 385 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 EARS2Q5JPH6 523 aaKnown RBP12.71□□□□□ -0.37
CLCF1-202ENST00000533438 POF1BQ8WVV4 589 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 ZNF668Q96K58 619 aaPredicted RBP12.71□□□□□ -0.37
CLCF1-202ENST00000533438 RNF19AQ9NV58 838 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 ORC3Q9UBD5 711 aaPredicted RBP12.71□□□□□ -0.37
CLCF1-202ENST00000533438 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 SEPT9Q9UHD8 586 aaPredicted RBP12.71□□□□□ -0.37
CLCF1-202ENST00000533438 VAV3Q9UKW4 847 aa12.71□□□□□ -0.37
CLCF1-202ENST00000533438 TBX3O15119 743 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 FGFR1P11362 822 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 GTF2F1P35269 517 aaKnown RBP eCLIP12.7□□□□□ -0.383e-8■■■■■ 35.7
CLCF1-202ENST00000533438 IRS1P35568 1242 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 PSMC5P62195 406 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 DLX2Q07687 328 aaPredicted RBP12.7□□□□□ -0.38
CLCF1-202ENST00000533438 ADAM15Q13444 863 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 PIK3AP1Q6ZUJ8 805 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 ANO5Q75V66 913 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 ADGRD2Q7Z7M1 963 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 HAS1Q92839 578 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 TNFRSF25Q93038 417 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 FAM20AQ96MK3 541 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 CASD1Q96PB1 797 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 SH2D3AQ9BRG2 576 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 CWH43Q9H720 699 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
CLCF1-202ENST00000533438 TYW1Q9NV66 732 aaKnown RBP12.7□□□□□ -0.38
CLCF1-202ENST00000533438 MUC6Q6W4X9 2439 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 FAM86C2PA6NEL3 165 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 LINC01565O15544 149 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 CCNT1O60563 726 aaKnown RBP12.69□□□□□ -0.38
CLCF1-202ENST00000533438 TBX10O75333 385 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 MAFO75444 373 aaPredicted RBP12.69□□□□□ -0.38
CLCF1-202ENST00000533438 CSPG5O95196 566 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
CLCF1-202ENST00000533438 FGFR4P22455 802 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 CDC42EP1Q00587 391 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 UBE3AQ05086 875 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 EP400NLQ6ZTU2 488 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 ECHDC2Q86YB7 292 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 NECAB1Q8N987 351 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 COLGALT1Q8NBJ5 622 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 NSUN7Q8NE18 718 aaKnown RBP12.69□□□□□ -0.38
CLCF1-202ENST00000533438 NLRP7Q8WX94 980 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 WASF1Q92558 559 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 GTF3C6Q969F1 213 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 NAP1L4Q99733 375 aaKnown RBP12.69□□□□□ -0.38
CLCF1-202ENST00000533438 TMEM117Q9H0C3 514 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 AAASQ9NRG9 546 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 WRAP73Q9P2S5 460 aaPredicted RBP12.69□□□□□ -0.38
CLCF1-202ENST00000533438 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
CLCF1-202ENST00000533438 PCDHB12Q9Y5F1 795 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 C5orf42Q9H799 3197 aa12.69□□□□□ -0.38
CLCF1-202ENST00000533438 A0A0U1RQF3 1178 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 DDX11L8A8MPP1 907 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 HOXA2O43364 376 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 MBTPS2O43462 519 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 CSDE1O75534 798 aaKnown RBP12.68□□□□□ -0.38
CLCF1-202ENST00000533438 FGF18O76093 207 aa12.68□□□□□ -0.38
CLCF1-202ENST00000533438 P4HBP07237 508 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms