RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 PHF7Q9BWX1 381 aaPredicted RBP17.15■□□□□ 0.34
BRPF3-210ENST00000532538 EIF4BP23588 611 aaKnown RBP17.14■□□□□ 0.33
BRPF3-210ENST00000532538 BMS1Q14692 1282 aaKnown RBP17.14■□□□□ 0.33
BRPF3-210ENST00000532538 PKN1Q16512 942 aa17.14■□□□□ 0.33
BRPF3-210ENST00000532538 DUSP6Q16828 381 aa17.14■□□□□ 0.33
BRPF3-210ENST00000532538 KCNT2Q6UVM3 1135 aa17.14■□□□□ 0.33
BRPF3-210ENST00000532538 MIER3Q7Z3K6 550 aa17.14■□□□□ 0.33
BRPF3-210ENST00000532538 CRYGNQ8WXF5 182 aa17.14■□□□□ 0.33
BRPF3-210ENST00000532538 RNF26Q9BY78 433 aaPredicted RBP17.14■□□□□ 0.33
BRPF3-210ENST00000532538 KCNH6Q9H252 994 aa17.14■□□□□ 0.33
BRPF3-210ENST00000532538 CWH43Q9H720 699 aa17.14■□□□□ 0.33
BRPF3-210ENST00000532538 SEPT9Q9UHD8 586 aaPredicted RBP17.14■□□□□ 0.33
BRPF3-210ENST00000532538 SNX14Q9Y5W7 946 aa17.14■□□□□ 0.33
BRPF3-210ENST00000532538 TMEM221A6NGB7 291 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 M0R296 226 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 CPLX1O14810 134 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 FGFR4P22455 802 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 RPS6KB1P23443 525 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 SP100P23497 879 aaPredicted RBP17.13■□□□□ 0.33
BRPF3-210ENST00000532538 SFNP31947 248 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 PPM1AP35813 382 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 PBX3P40426 434 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 MRE11P49959 708 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 JAK3P52333 1124 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 DSC3Q14574 896 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 MTERF2Q49AM1 385 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 ECHDC2Q86YB7 292 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 ZNF710Q8N1W2 664 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 DACT1Q9NYF0 836 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 SPG21Q9NZD8 308 aa17.13■□□□□ 0.33
BRPF3-210ENST00000532538 MYO10Q9HD67 2058 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 TECTAO75443 2155 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 MSH4O15457 936 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 CIITAP33076 1130 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 HSPA4P34932 840 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 DNM2P50570 870 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 USP11P51784 963 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 FAM189BP81408 668 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 NHLH1Q02575 133 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
BRPF3-210ENST00000532538 TRIM67Q6ZTA4 783 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 HELQQ8TDG4 1101 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 GJA10Q969M2 543 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 CASD1Q96PB1 797 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 GCOM2Q9BZD3 368 aaPredicted RBP17.12■□□□□ 0.33
BRPF3-210ENST00000532538 C22orf23Q9BZE7 217 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 UNC45AQ9H3U1 944 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 NCOA5Q9HCD5 579 aaKnown RBP17.12■□□□□ 0.33
BRPF3-210ENST00000532538 NGRNQ9NPE2 291 aaKnown RBP17.12■□□□□ 0.33
BRPF3-210ENST00000532538 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 LZTS1Q9Y250 596 aa17.12■□□□□ 0.33
BRPF3-210ENST00000532538 LOC730098B7Z3J9 87 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 REC8O95072 547 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 ALDH7A1P49419 539 aaKnown RBP17.11■□□□□ 0.33
BRPF3-210ENST00000532538 GPC3P51654 580 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 ZXDAP98168 799 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 PLCB3Q01970 1234 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 CBX2Q14781 532 aaPredicted RBP17.11■□□□□ 0.33
BRPF3-210ENST00000532538 ANKRD54Q6NXT1 300 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 RIT2Q99578 217 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 SLKQ9H2G2 1235 aaPredicted RBP17.11■□□□□ 0.33
BRPF3-210ENST00000532538 ADAMTS10Q9H324 1103 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 C5orf42Q9H799 3197 aa17.11■□□□□ 0.33
BRPF3-210ENST00000532538 SPDYE4A6NLX3 237 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 HIDE1A8MVS5 230 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 FSCN2O14926 492 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 ZNF862O60290 1169 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 CSDE1O75534 798 aaKnown RBP17.1■□□□□ 0.33
BRPF3-210ENST00000532538 DARSP14868 501 aaKnown RBP17.1■□□□□ 0.33
BRPF3-210ENST00000532538 IFNAR1P17181 557 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 ATF7P17544 494 aaPredicted RBP17.1■□□□□ 0.33
BRPF3-210ENST00000532538 SMC1AQ14683 1233 aaKnown RBP17.1■□□□□ 0.33
BRPF3-210ENST00000532538 UGCGQ16739 394 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 LONRF3Q496Y0 759 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 TWF2Q6IBS0 349 aaKnown RBP17.1■□□□□ 0.33
BRPF3-210ENST00000532538 CES5AQ6NT32 575 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 LRRC55Q6ZSA7 311 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 VN1R2Q8NFZ6 395 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 CASP10Q92851 521 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 LENG9Q96B70 501 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 TMEM169Q96HH4 297 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 MRPL9Q9BYD2 267 aaKnown RBP17.1■□□□□ 0.33
BRPF3-210ENST00000532538 SH3GLB2Q9NR46 395 aa17.1■□□□□ 0.33
BRPF3-210ENST00000532538 DDX11L8A8MPP1 907 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 NT5C1B-RDH14C9J2C7 533 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 MARCH6O60337 910 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 EOMESO95936 686 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
BRPF3-210ENST00000532538 PDIA3P30101 505 aaKnown RBP17.09■□□□□ 0.33
BRPF3-210ENST00000532538 STK3Q13188 491 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 TPRNQ4KMQ1 711 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 CPLX2Q6PUV4 134 aaKnown RBP17.09■□□□□ 0.33
BRPF3-210ENST00000532538 RHPN2Q8IUC4 686 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 SLC5A5Q92911 643 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 SH2D3AQ9BRG2 576 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 PCDHA4Q9UN74 947 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 INPP5FQ9Y2H2 1132 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 NID2Q14112 1375 aa17.09■□□□□ 0.33
BRPF3-210ENST00000532538 ZNF318Q5VUA4 2279 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms