RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ZNF507Q8TCN5 953 aa24.25■■□□□ 1.47
PACSIN3-209ENST00000532457 ATP8B4Q8TF62 1192 aa24.25■■□□□ 1.47
PACSIN3-209ENST00000532457 BSNDQ8WZ55 320 aa24.25■■□□□ 1.47
PACSIN3-209ENST00000532457 STRA6Q9BX79 667 aa24.25■■□□□ 1.47
PACSIN3-209ENST00000532457 DHX33Q9H6R0 707 aaKnown RBP24.25■■□□□ 1.47
PACSIN3-209ENST00000532457 MYH11P35749 1972 aa24.25■■□□□ 1.47
PACSIN3-209ENST00000532457 MMP3P08254 477 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 ZNF286BP0CG31 522 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 PLS3P13797 630 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 PPP1R2P41236 205 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 ZNF75DP51815 510 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 FANCCQ00597 558 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 BBXQ8WY36 941 aaPredicted RBP24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 DEFB118Q96PH6 123 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 PPP1R9BQ96SB3 815 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 TIPINQ9BVW5 301 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 SRRTQ9BXP5 876 aaKnown RBP24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 TRIM5Q9C035 493 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 AP5M1Q9H0R1 490 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 SEL1LQ9UBV2 794 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 GCNT3O95395 438 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 GJB1P08034 283 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 ZCWPW2Q504Y3 356 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 TLK2Q86UE8 772 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 NAP1L5Q96NT1 182 aaPredicted RBP24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 XPNPEP3Q9NQH7 507 aa24.24■■□□□ 1.47
PACSIN3-209ENST00000532457 CAPN2P17655 700 aa24.23■■□□□ 1.47
PACSIN3-209ENST00000532457 TPM4P67936 248 aa24.23■■□□□ 1.47
PACSIN3-209ENST00000532457 BRDTQ58F21 947 aaPredicted RBP24.23■■□□□ 1.47
PACSIN3-209ENST00000532457 APTXQ7Z2E3 356 aaKnown RBP24.23■■□□□ 1.47
PACSIN3-209ENST00000532457 FAM178BQ8IXR5 827 aa24.23■■□□□ 1.47
PACSIN3-209ENST00000532457 A6NJR5 290 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 PEX3P56589 373 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 EMC2Q15006 297 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 BMT2Q1RMZ1 405 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 LHX8Q68G74 356 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 TRAPPC12Q8WVT3 735 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 TMEM143Q96AN5 459 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 ZBTB10Q96DT7 871 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 DRC1Q96MC2 740 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 ATP6V0A4Q9HBG4 840 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 ERAP1Q9NZ08 941 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 IFNKQ9P0W0 207 aa24.22■■□□□ 1.47
PACSIN3-209ENST00000532457 PPP1R37O75864 691 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 SLC26A2P50443 739 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 TPD52L1Q16890 204 aaPredicted RBP24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 ANP32BQ92688 251 aaKnown RBP24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 FAM167AQ96KS9 214 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 LARSQ9P2J5 1176 aaKnown RBP24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 BICDL2A1A5D9 508 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 CPT1AP50416 773 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 POLGP54098 1239 aaPredicted RBP24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 GJA9P57773 515 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 DRP2Q13474 957 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 KNOP1Q1ED39 458 aaKnown RBP24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 RNF180Q86T96 592 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 CSGALNACT2Q8N6G5 542 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 MCPH1Q8NEM0 835 aa24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 XPO4Q9C0E2 1151 aaKnown RBP24.21■■□□□ 1.47
PACSIN3-209ENST00000532457 MAFO75444 373 aaPredicted RBP24.2■■□□□ 1.46
PACSIN3-209ENST00000532457 SGPL1O95470 568 aa24.2■■□□□ 1.46
PACSIN3-209ENST00000532457 CDK11BP21127 795 aaKnown RBP24.2■■□□□ 1.46
PACSIN3-209ENST00000532457 NPTX2P47972 431 aa24.2■■□□□ 1.46
PACSIN3-209ENST00000532457 MKRN4PQ13434 485 aaPredicted RBP24.2■■□□□ 1.46
PACSIN3-209ENST00000532457 DGKDQ16760 1214 aa24.2■■□□□ 1.46
PACSIN3-209ENST00000532457 ARRDC4Q8NCT1 418 aa24.2■■□□□ 1.46
PACSIN3-209ENST00000532457 U2AF1L4Q8WU68 220 aaKnown RBP24.2■■□□□ 1.46
PACSIN3-209ENST00000532457 POLR3FQ9H1D9 316 aaPredicted RBP24.2■■□□□ 1.46
PACSIN3-209ENST00000532457 SLC16A4O15374 487 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 HBP1O60381 514 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 C6orf222P0C671 652 aaPredicted RBP24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 ARL2P36404 184 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 BEX3Q00994 111 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 CCDC173Q0VFZ6 552 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 KIFAP3Q92845 792 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 KIFC3Q9BVG8 833 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 UPF3AQ9H1J1 476 aaKnown RBP24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 INTS13Q9NVM9 706 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 TRPC6Q9Y210 931 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 H3BRB1 525 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 EIF3DO15371 548 aaKnown RBP eCLIP24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 TGFB1I1O43294 461 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 PGK1P00558 417 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 MAPTP10636 758 aaKnown RBP24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 GJA8P48165 433 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 TNS4Q8IZW8 715 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 ASAP3Q8TDY4 903 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 KAT2BQ92831 832 aa24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 NTPCRQ9BSD7 190 aaKnown RBP24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 TUT1Q9H6E5 874 aaKnown RBP24.19■■□□□ 1.46
PACSIN3-209ENST00000532457 ZMYM2Q9UBW7 1377 aa24.18■■□□□ 1.46
PACSIN3-209ENST00000532457 ZEB2O60315 1214 aa24.18■■□□□ 1.46
PACSIN3-209ENST00000532457 INSRRP14616 1297 aa24.18■■□□□ 1.46
PACSIN3-209ENST00000532457 RFC5P40937 340 aa24.18■■□□□ 1.46
PACSIN3-209ENST00000532457 NCKAP1LP55160 1127 aa24.18■■□□□ 1.46
PACSIN3-209ENST00000532457 NKX3-2P78367 333 aa24.18■■□□□ 1.46
PACSIN3-209ENST00000532457 LRRC63Q05C16 580 aa24.18■■□□□ 1.46
PACSIN3-209ENST00000532457 FSCN1Q16658 493 aaKnown RBP24.18■■□□□ 1.46
PACSIN3-209ENST00000532457 TCP11X2Q5H9J9 407 aa24.18■■□□□ 1.46
PACSIN3-209ENST00000532457 LRRC55Q6ZSA7 311 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms