RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 GTPBP6O43824 516 aaPredicted RBP25.68■■□□□ 1.7
CAPN1-222ENST00000532285 DARSP14868 501 aaKnown RBP25.68■■□□□ 1.7
CAPN1-222ENST00000532285 POLGP54098 1239 aaPredicted RBP25.68■■□□□ 1.7
CAPN1-222ENST00000532285 XKR9Q5GH70 373 aa25.68■■□□□ 1.7
CAPN1-222ENST00000532285 MCTP1Q6DN14 999 aa25.68■■□□□ 1.7
CAPN1-222ENST00000532285 ZNF579Q8NAF0 562 aaKnown RBP25.68■■□□□ 1.7
CAPN1-222ENST00000532285 ZNF668Q96K58 619 aaPredicted RBP25.68■■□□□ 1.7
CAPN1-222ENST00000532285 RGS18Q9NS28 235 aa25.68■■□□□ 1.7
CAPN1-222ENST00000532285 C1orf112Q9NSG2 853 aa25.68■■□□□ 1.7
CAPN1-222ENST00000532285 MTUS1Q9ULD2 1270 aa25.68■■□□□ 1.7
CAPN1-222ENST00000532285 UNC80Q8N2C7 3258 aa25.67■■□□□ 1.7
CAPN1-222ENST00000532285 ZBTB39O15060 712 aa25.67■■□□□ 1.7
CAPN1-222ENST00000532285 MGEA5O60502 916 aa25.67■■□□□ 1.7
CAPN1-222ENST00000532285 DGKIO75912 1065 aa25.67■■□□□ 1.7
CAPN1-222ENST00000532285 TECP42680 631 aa25.67■■□□□ 1.7
CAPN1-222ENST00000532285 SARSP49591 514 aaKnown RBP25.67■■□□□ 1.7
CAPN1-222ENST00000532285 RHPN2Q8IUC4 686 aa25.67■■□□□ 1.7
CAPN1-222ENST00000532285 FIBCD1Q8N539 461 aa25.67■■□□□ 1.7
CAPN1-222ENST00000532285 ZNF689Q96CS4 500 aaPredicted RBP25.67■■□□□ 1.7
CAPN1-222ENST00000532285 GCOM2Q9BZD3 368 aaPredicted RBP25.67■■□□□ 1.7
CAPN1-222ENST00000532285 RC3H2Q9HBD1 1191 aaKnown RBP25.67■■□□□ 1.7
CAPN1-222ENST00000532285 ANKEF1Q9NU02 776 aa25.67■■□□□ 1.7
CAPN1-222ENST00000532285 LRFN2Q9ULH4 789 aa25.67■■□□□ 1.7
CAPN1-222ENST00000532285 GAS2O43903 313 aaKnown RBP25.66■■□□□ 1.7
CAPN1-222ENST00000532285 TOB1P50616 345 aaPredicted RBP25.66■■□□□ 1.7
CAPN1-222ENST00000532285 GRB10Q13322 594 aa25.66■■□□□ 1.7
CAPN1-222ENST00000532285 SLC24A5Q71RS6 500 aa25.66■■□□□ 1.7
CAPN1-222ENST00000532285 ZNF410Q86VK4 478 aa25.66■■□□□ 1.7
CAPN1-222ENST00000532285 C4orf32Q8N8J7 132 aa25.66■■□□□ 1.7
CAPN1-222ENST00000532285 FBXO22Q8NEZ5 403 aa25.66■■□□□ 1.7
CAPN1-222ENST00000532285 C17orf80Q9BSJ5 609 aa25.66■■□□□ 1.7
CAPN1-222ENST00000532285 MTCH2Q9Y6C9 303 aa25.66■■□□□ 1.7
CAPN1-222ENST00000532285 FNDC1Q4ZHG4 1894 aaPredicted RBP25.66■■□□□ 1.7
CAPN1-222ENST00000532285 REV3LO60673 3130 aa25.66■■□□□ 1.7
CAPN1-222ENST00000532285 ADGRA3Q8IWK6 1321 aa25.65■■□□□ 1.7
CAPN1-222ENST00000532285 XRCC6P12956 609 aaKnown RBP eCLIP25.65■■□□□ 1.7
CAPN1-222ENST00000532285 CUL4AQ13619 759 aa25.65■■□□□ 1.7
CAPN1-222ENST00000532285 DSC3Q14574 896 aa25.65■■□□□ 1.7
CAPN1-222ENST00000532285 NBR1Q14596 966 aa25.65■■□□□ 1.7
CAPN1-222ENST00000532285 ERMNQ8TAM6 284 aa25.65■■□□□ 1.7
CAPN1-222ENST00000532285 TCP11Q8WWU5 503 aa25.65■■□□□ 1.7
CAPN1-222ENST00000532285 PPM1EQ8WY54 764 aa25.65■■□□□ 1.7
CAPN1-222ENST00000532285 INO80BQ9C086 356 aaPredicted RBP25.65■■□□□ 1.7
CAPN1-222ENST00000532285 TUFT1Q9NNX1 390 aa25.65■■□□□ 1.7
CAPN1-222ENST00000532285 PCDHB7Q9Y5E2 793 aa25.65■■□□□ 1.7
CAPN1-222ENST00000532285 PRRC2BQ5JSZ5 2229 aaKnown RBP25.65■■□□□ 1.7
CAPN1-222ENST00000532285 A0A087WZ62 844 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 C9IYK1 514 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 LPXNO60711 386 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 SPATA31C1P0DKV0 1188 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 ZSCAN20P17040 1043 aaPredicted RBP25.64■■□□□ 1.7
CAPN1-222ENST00000532285 BTG3Q14201 252 aaPredicted RBP25.64■■□□□ 1.7
CAPN1-222ENST00000532285 EMC2Q15006 297 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 CCDC85BQ15834 202 aaPredicted RBP25.64■■□□□ 1.7
CAPN1-222ENST00000532285 EPC2Q52LR7 807 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 LARP1BQ659C4 914 aaKnown RBP25.64■■□□□ 1.7
CAPN1-222ENST00000532285 TMEM192Q8IY95 271 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 GDPD5Q8WTR4 605 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 PSPC1Q8WXF1 523 aaKnown RBP25.64■■□□□ 1.7
CAPN1-222ENST00000532285 FDXACB1Q9BRP7 624 aaPredicted RBP25.64■■□□□ 1.7
CAPN1-222ENST00000532285 POLR3CQ9BUI4 534 aaPredicted RBP25.64■■□□□ 1.7
CAPN1-222ENST00000532285 LMCD1Q9NZU5 365 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 PCDHB6Q9Y5E3 794 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 COL4A3BPQ9Y5P4 624 aa25.64■■□□□ 1.7
CAPN1-222ENST00000532285 FXR2P51116 673 aaKnown RBP eCLIP25.63■■□□□ 1.69
CAPN1-222ENST00000532285 FAM189BP81408 668 aa25.63■■□□□ 1.69
CAPN1-222ENST00000532285 PTGDRQ13258 359 aa25.63■■□□□ 1.69
CAPN1-222ENST00000532285 RILPL1Q5EBL4 403 aa25.63■■□□□ 1.69
CAPN1-222ENST00000532285 CATSPER3Q86XQ3 398 aa25.63■■□□□ 1.69
CAPN1-222ENST00000532285 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.63■■□□□ 1.69
CAPN1-222ENST00000532285 TMEM143Q96AN5 459 aa25.63■■□□□ 1.69
CAPN1-222ENST00000532285 CCDC43Q96MW1 224 aaKnown RBP25.63■■□□□ 1.69
CAPN1-222ENST00000532285 RWDD3Q9Y3V2 267 aa25.63■■□□□ 1.69
CAPN1-222ENST00000532285 KIAA1671Q9BY89 1806 aa25.63■■□□□ 1.69
CAPN1-222ENST00000532285 LAD1O00515 517 aa25.62■■□□□ 1.69
CAPN1-222ENST00000532285 ASAP2O43150 1006 aa25.62■■□□□ 1.69
CAPN1-222ENST00000532285 KSR1Q8IVT5 923 aa25.62■■□□□ 1.69
CAPN1-222ENST00000532285 CMTR2Q8IYT2 770 aaKnown RBP25.62■■□□□ 1.69
CAPN1-222ENST00000532285 MICALL1Q8N3F8 863 aa25.62■■□□□ 1.69
CAPN1-222ENST00000532285 PRPF31Q8WWY3 499 aaKnown RBP25.62■■□□□ 1.69
CAPN1-222ENST00000532285 CLP1Q92989 425 aaKnown RBP25.62■■□□□ 1.69
CAPN1-222ENST00000532285 NLRP4Q96MN2 994 aa25.62■■□□□ 1.69
CAPN1-222ENST00000532285 MTRQ99707 1265 aa25.62■■□□□ 1.69
CAPN1-222ENST00000532285 MED24O75448 989 aa25.61■■□□□ 1.69
CAPN1-222ENST00000532285 CSDE1O75534 798 aaKnown RBP25.61■■□□□ 1.69
CAPN1-222ENST00000532285 DGAT1O75907 488 aa25.61■■□□□ 1.69
CAPN1-222ENST00000532285 IBSPP21815 317 aaPredicted RBP25.61■■□□□ 1.69
CAPN1-222ENST00000532285 FGFR4P22455 802 aa25.61■■□□□ 1.69
CAPN1-222ENST00000532285 SFPQP23246 707 aaKnown RBP eCLIP25.61■■□□□ 1.69
CAPN1-222ENST00000532285 RPA1P27694 616 aa25.61■■□□□ 1.69
CAPN1-222ENST00000532285 RARRES1P49788 294 aa25.61■■□□□ 1.69
CAPN1-222ENST00000532285 PDIA5Q14554 519 aa25.61■■□□□ 1.69
CAPN1-222ENST00000532285 PIGOQ8TEQ8 1089 aa25.61■■□□□ 1.69
CAPN1-222ENST00000532285 NACC1Q96RE7 527 aa25.61■■□□□ 1.69
CAPN1-222ENST00000532285 ELAC1Q9H777 363 aaKnown RBP25.61■■□□□ 1.69
CAPN1-222ENST00000532285 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.61■■□□□ 1.69
CAPN1-222ENST00000532285 BMP2KQ9NSY1 1161 aaPredicted RBP25.61■■□□□ 1.69
CAPN1-222ENST00000532285 TMEM161AQ9NX61 479 aa25.61■■□□□ 1.69
CAPN1-222ENST00000532285 MUTP22033 750 aa25.6■■□□□ 1.69
CAPN1-222ENST00000532285 LAMTOR4Q0VGL1 99 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms