RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 PCDHA10Q9Y5I2 948 aa21.56■■□□□ 1.04
UBXN1-212ENST00000531625 RIF1Q5UIP0 2472 aaKnown RBP21.56■■□□□ 1.04
UBXN1-212ENST00000531625 PSAPP07602 524 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 CDC27P30260 824 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 KRT17Q04695 432 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 PFKFB3Q16875 520 aaPredicted RBP21.55■■□□□ 1.04
UBXN1-212ENST00000531625 ADCK5Q3MIX3 580 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 LRRC43Q8N309 656 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 FAM167AQ96KS9 214 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 TCEANC2Q96MN5 208 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 ZNF558Q96NG5 402 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 ZMYND12Q9H0C1 365 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 ADAMTS10Q9H324 1103 aa21.55■■□□□ 1.04
UBXN1-212ENST00000531625 HIDE1A8MVS5 230 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 ZSCAN20P17040 1043 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-212ENST00000531625 EIF4BP23588 611 aaKnown RBP21.54■■□□□ 1.04
UBXN1-212ENST00000531625 TMOD1P28289 359 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 CLCN3P51790 818 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 NLRP11P59045 1033 aaKnown RBP21.54■■□□□ 1.04
UBXN1-212ENST00000531625 ECHDC2Q86YB7 292 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 ABI1Q8IZP0 508 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 MAP7D2Q96T17 732 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 IRF2BPLQ9H1B7 796 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 UPF2Q9HAU5 1272 aaKnown RBP21.54■■□□□ 1.04
UBXN1-212ENST00000531625 SPG21Q9NZD8 308 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 TCEAL9Q9UHQ7 104 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 MYO10Q9HD67 2058 aa21.54■■□□□ 1.04
UBXN1-212ENST00000531625 KLF18A0A0U1RQI7 1052 aa21.53■■□□□ 1.04
UBXN1-212ENST00000531625 ST18O60284 1047 aa21.53■■□□□ 1.04
UBXN1-212ENST00000531625 AVPR2P30518 371 aa21.53■■□□□ 1.04
UBXN1-212ENST00000531625 VCPP55072 806 aaKnown RBP21.53■■□□□ 1.04
UBXN1-212ENST00000531625 EFCAB12Q6NXP0 572 aa21.53■■□□□ 1.04
UBXN1-212ENST00000531625 TMC7Q7Z402 723 aa21.53■■□□□ 1.04
UBXN1-212ENST00000531625 REXO1Q8N1G1 1221 aaKnown RBP21.53■■□□□ 1.04
UBXN1-212ENST00000531625 CASP10Q92851 521 aa21.53■■□□□ 1.04
UBXN1-212ENST00000531625 BACH2Q9BYV9 841 aa21.53■■□□□ 1.04
UBXN1-212ENST00000531625 GABBR1Q9UBS5 961 aa21.53■■□□□ 1.04
UBXN1-212ENST00000531625 AKT3Q9Y243 479 aa21.53■■□□□ 1.04
UBXN1-212ENST00000531625 PSMA5P28066 241 aa21.52■■□□□ 1.04
UBXN1-212ENST00000531625 CIITAP33076 1130 aa21.52■■□□□ 1.04
UBXN1-212ENST00000531625 NUBP1P53384 320 aa21.52■■□□□ 1.04
UBXN1-212ENST00000531625 TPRNQ4KMQ1 711 aa21.52■■□□□ 1.04
UBXN1-212ENST00000531625 LLGL2Q6P1M3 1020 aa21.52■■□□□ 1.04
UBXN1-212ENST00000531625 TRMT1LQ7Z2T5 733 aaKnown RBP21.52■■□□□ 1.04
UBXN1-212ENST00000531625 MRPL43Q8N983 215 aaKnown RBP21.52■■□□□ 1.04
UBXN1-212ENST00000531625 CCDC12Q8WUD4 166 aaPredicted RBP21.52■■□□□ 1.04
UBXN1-212ENST00000531625 C6orf50Q9HD87 102 aa21.52■■□□□ 1.04
UBXN1-212ENST00000531625 NR2E1Q9Y466 385 aa21.52■■□□□ 1.04
UBXN1-212ENST00000531625 WDR81Q562E7 1941 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 A0A0U1RQF3 1178 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 CCDC196A0A1B0GTZ2 297 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 WDR64B1ANS9 1081 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 EOMESO95936 686 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 HMGB1P09429 215 aaKnown RBP21.51■■□□□ 1.03
UBXN1-212ENST00000531625 ADD1P35611 737 aaKnown RBP21.51■■□□□ 1.03
UBXN1-212ENST00000531625 PBX3P40426 434 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 ITIH3Q06033 890 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 SMC1AQ14683 1233 aaKnown RBP21.51■■□□□ 1.03
UBXN1-212ENST00000531625 PRR16Q569H4 304 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 CLLU1OSQ5K130 101 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 BLOC1S2Q6QNY1 142 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 ZNF598Q86UK7 904 aaKnown RBP21.51■■□□□ 1.03
UBXN1-212ENST00000531625 SLC39A11Q8N1S5 342 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 NECTIN4Q96NY8 510 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 NRBP2Q9NSY0 501 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 SPTBN4Q9H254 2564 aa21.51■■□□□ 1.03
UBXN1-212ENST00000531625 ADAMTS3O15072 1205 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 ZNF862O60290 1169 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 DARSP14868 501 aaKnown RBP21.5■■□□□ 1.03
UBXN1-212ENST00000531625 CPA1P15085 419 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 GNA11P29992 359 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 GPC3P51654 580 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 ANAPC15P60006 121 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 ZBTB33Q86T24 672 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 UBALD2Q8IYN6 164 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 LRRC71Q8N4P6 559 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 LENG9Q96B70 501 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 RIPOR3Q96MK2 946 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 APOL5Q9BWW9 433 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 C22orf23Q9BZE7 217 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 ADAM7Q9H2U9 754 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 SAMM50Q9Y512 469 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 HCFC2Q9Y5Z7 792 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 MYO15AQ9UKN7 3530 aa21.5■■□□□ 1.03
UBXN1-212ENST00000531625 C2orf71A6NGG8 1288 aa21.49■■□□□ 1.03
UBXN1-212ENST00000531625 OATP04181 439 aa21.49■■□□□ 1.03
UBXN1-212ENST00000531625 METAP2P50579 478 aaKnown RBP eCLIP21.49■■□□□ 1.03
UBXN1-212ENST00000531625 CES5AQ6NT32 575 aa21.49■■□□□ 1.03
UBXN1-212ENST00000531625 KREMEN2Q8NCW0 462 aa21.49■■□□□ 1.03
UBXN1-212ENST00000531625 RSPH1Q8WYR4 309 aa21.49■■□□□ 1.03
UBXN1-212ENST00000531625 MRPL9Q9BYD2 267 aaKnown RBP21.49■■□□□ 1.03
UBXN1-212ENST00000531625 DISC1Q9NRI5 854 aa21.49■■□□□ 1.03
UBXN1-212ENST00000531625 FAM186AA6NE01 2351 aa21.49■■□□□ 1.03
UBXN1-212ENST00000531625 RNF169Q8NCN4 708 aa21.48■■□□□ 1.03
UBXN1-212ENST00000531625 BICD2Q8TD16 824 aa21.48■■□□□ 1.03
UBXN1-212ENST00000531625 DACT1Q9NYF0 836 aa21.48■■□□□ 1.03
UBXN1-212ENST00000531625 SORCS3Q9UPU3 1222 aa21.48■■□□□ 1.03
UBXN1-212ENST00000531625 PRPF3O43395 683 aaKnown RBP21.47■■□□□ 1.03
UBXN1-212ENST00000531625 CLASP2O75122 1294 aaKnown RBP21.47■■□□□ 1.03
UBXN1-212ENST00000531625 RPS6KB1P23443 525 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms