RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 UHMK1Q8TAS1 419 aaKnown RBP7.12□□□□□ -1.27
CASP4-210ENST00000531546 KCTD13Q8WZ19 329 aa7.12□□□□□ -1.27
CASP4-210ENST00000531546 JAM3Q9BX67 310 aa7.12□□□□□ -1.27
CASP4-210ENST00000531546 PXDNQ92626 1479 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 ZNF839A8K0R7 811 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 AGRPO00253 132 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 CR2P20023 1033 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 POLD1P28340 1107 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 PFKPQ01813 784 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 SPIRE1Q08AE8 756 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 C1orf210Q8IVY1 113 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 IKZF4Q9H2S9 585 aa7.11□□□□□ -1.27
CASP4-210ENST00000531546 METP08581 1390 aa7.1□□□□□ -1.27
CASP4-210ENST00000531546 GRK2P25098 689 aa7.1□□□□□ -1.27
CASP4-210ENST00000531546 GRK3P35626 688 aa7.1□□□□□ -1.27
CASP4-210ENST00000531546 RSPO2Q6UXX9 243 aaPredicted RBP7.1□□□□□ -1.27
CASP4-210ENST00000531546 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.1□□□□□ -1.27
CASP4-210ENST00000531546 EPN3Q9H201 632 aa7.1□□□□□ -1.27
CASP4-210ENST00000531546 MSL2Q9HCI7 577 aa7.1□□□□□ -1.27
CASP4-210ENST00000531546 PTPN22Q9Y2R2 807 aa7.1□□□□□ -1.27
CASP4-210ENST00000531546 LRPPRCP42704 1394 aaKnown RBP7.09□□□□□ -1.27
CASP4-210ENST00000531546 A0A087X1B8 175 aa7.09□□□□□ -1.27
CASP4-210ENST00000531546 B2RBV5 119 aa7.09□□□□□ -1.27
CASP4-210ENST00000531546 SMAD7O15105 426 aaKnown RBP7.09□□□□□ -1.27
CASP4-210ENST00000531546 GNAT1P11488 350 aa7.09□□□□□ -1.27
CASP4-210ENST00000531546 NEU4Q8WWR8 484 aaPredicted RBP7.09□□□□□ -1.27
CASP4-210ENST00000531546 TACO1Q9BSH4 297 aaKnown RBP7.09□□□□□ -1.27
CASP4-210ENST00000531546 TGIF2Q9GZN2 237 aa7.09□□□□□ -1.27
CASP4-210ENST00000531546 INPP5FQ9Y2H2 1132 aa7.09□□□□□ -1.27
CASP4-210ENST00000531546 LMTK2Q8IWU2 1503 aa7.09□□□□□ -1.27
CASP4-210ENST00000531546 CASZ1Q86V15 1759 aa7.09□□□□□ -1.27
CASP4-210ENST00000531546 ATP10DQ9P241 1426 aa7.09□□□□□ -1.28
CASP4-210ENST00000531546 CDC14BO60729 498 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 DDAH1O94760 285 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 ACRV1P26436 265 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 KIZQ2M2Z5 673 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 DPP8Q6V1X1 898 aaPredicted RBP7.08□□□□□ -1.28
CASP4-210ENST00000531546 Q6ZSN1 163 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 EEPD1Q7L9B9 569 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 SCYL1Q96KG9 808 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 PLEKHG4BQ96PX9 1271 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 OR14A2Q96R54 314 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 PPARGC1AQ9UBK2 798 aaKnown RBP7.08□□□□□ -1.28
CASP4-210ENST00000531546 ABCC5O15440 1437 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 NRXN3Q9Y4C0 1643 aa7.08□□□□□ -1.28
CASP4-210ENST00000531546 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 PPFIA2O75334 1257 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 IL18BPO95998 194 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 LTFP02788 710 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 ADH4P08319 380 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 TGM1P22735 817 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 RPS19P39019 145 aaKnown RBP7.07□□□□□ -1.28
CASP4-210ENST00000531546 NANOS3P60323 173 aaKnown RBP7.07□□□□□ -1.28
CASP4-210ENST00000531546 DGCR2P98153 550 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 TOP3AQ13472 1001 aaPredicted RBP7.07□□□□□ -1.28
CASP4-210ENST00000531546 FXNQ16595 210 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 RNF151Q2KHN1 245 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 MAMDC4Q6UXC1 1216 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 RBM12BQ8IXT5 1001 aaKnown RBP7.07□□□□□ -1.28
CASP4-210ENST00000531546 CACTINQ8WUQ7 758 aaKnown RBP7.07□□□□□ -1.28
CASP4-210ENST00000531546 PHF20Q9BVI0 1012 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 USP35Q9P2H5 1018 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 NR2E1Q9Y466 385 aa7.07□□□□□ -1.28
CASP4-210ENST00000531546 THSD7AQ9UPZ6 1657 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 SPATA31A3Q5VYP0 1347 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 MSCO60682 206 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 CAPNS1P04632 268 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 C1SP09871 688 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 EPHA5P54756 1037 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 PPP2R2AP63151 447 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 MRM1Q6IN84 353 aaKnown RBP7.06□□□□□ -1.28
CASP4-210ENST00000531546 USP53Q70EK8 1073 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 KCTD1Q719H9 257 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 DPYSL5Q9BPU6 564 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 ACBD3Q9H3P7 528 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 AURKAIP1Q9NWT8 199 aaPredicted RBP7.06□□□□□ -1.28
CASP4-210ENST00000531546 DSEQ9UL01 958 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 ABCA3Q99758 1704 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 ANKRD30AQ9BXX3 1397 aa7.06□□□□□ -1.28
CASP4-210ENST00000531546 CCDC144AA2RUR9 1427 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 DAPK1P53355 1430 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 ETV4P43268 484 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 RRADP55042 308 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 TUBA3CQ13748 450 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 FAM50AQ14320 339 aaKnown RBP7.05□□□□□ -1.28
CASP4-210ENST00000531546 TUBA3EQ6PEY2 450 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 IL17DQ8TAD2 202 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 ZFYVE21Q9BQ24 234 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 IER2Q9BTL4 223 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 CROCC2H7BZ55 1655 aa7.05□□□□□ -1.28
CASP4-210ENST00000531546 SPATA31A5Q5VU36 1347 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 SPATA31A7Q8IWB4 1347 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 TNS3Q68CZ2 1445 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 ESYT3A0FGR9 886 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 SSBP05455 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
CASP4-210ENST00000531546 ATF4P18848 351 aaPredicted RBP7.04□□□□□ -1.28
CASP4-210ENST00000531546 MAKP20794 623 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 DNAJA1P31689 397 aaKnown RBP7.04□□□□□ -1.28
CASP4-210ENST00000531546 GRIA2P42262 883 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms