RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PPM1AP35813 382 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 NUBP1P53384 320 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 FOXK2Q01167 660 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 ITIH3Q06033 890 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 KCNC3Q14003 757 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 TMC5Q6UXY8 1006 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 ECHDC2Q86YB7 292 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 ADSSL1Q8N142 457 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 VPS52Q8N1B4 723 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 LRRC43Q8N309 656 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 LRRC71Q8N4P6 559 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 TDRD5Q8NAT2 981 aaKnown RBP10.48□□□□□ -0.73
NEDD8-206ENST00000531430 RASGRP4Q8TDF6 673 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 TMEM169Q96HH4 297 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 MAP7D2Q96T17 732 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 ZNF577Q9BSK1 485 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 GBP3Q9H0R5 595 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 FBXL21Q9UKT6 434 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 FNDC1Q4ZHG4 1894 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-206ENST00000531430 IGKV6D-21A0A0A0MT36 114 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-206ENST00000531430 PRR23AA6NEV1 266 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 IPO5O00410 1097 aaKnown RBP10.47□□□□□ -0.73
NEDD8-206ENST00000531430 MAGEB2O15479 319 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 CSDE1O75534 798 aaKnown RBP10.47□□□□□ -0.73
NEDD8-206ENST00000531430 C22orf31O95567 290 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 PSAPP07602 524 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 MYBP10242 640 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 EPCAMP16422 314 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 RFX1P22670 979 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 LIFRP42702 1097 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 ID4P47928 161 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 BCAR1P56945 870 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 COL9A3Q14050 684 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-206ENST00000531430 DSC3Q14574 896 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 TYW1BQ6NUM6 668 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 CABP7Q86V35 215 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 NLRP7Q8WX94 980 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-206ENST00000531430 ACSF2Q96CM8 615 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-206ENST00000531430 NRBP2Q9NSY0 501 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 RNF19AQ9NV58 838 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 CEP131Q9UPN4 1083 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 COL1A2P08123 1366 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 KMT2EQ8IZD2 1858 aa10.47□□□□□ -0.73
NEDD8-206ENST00000531430 PROB1E7EW31 1015 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 FAM86B1E9PN63 330 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 SLC27A2O14975 620 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 PI15O43692 258 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 ZC3H11AO75152 810 aaKnown RBP eCLIP10.46□□□□□ -0.73
NEDD8-206ENST00000531430 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
NEDD8-206ENST00000531430 FAM86B2P0C5J1 330 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 EIF4BP23588 611 aaKnown RBP10.46□□□□□ -0.73
NEDD8-206ENST00000531430 NBL1P41271 181 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 RNASELQ05823 741 aaKnown RBP10.46□□□□□ -0.73
NEDD8-206ENST00000531430 RTN1Q16799 776 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 CLLU1OSQ5K130 101 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 MCTP2Q6DN12 878 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 FAM43BQ6ZT52 329 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-206ENST00000531430 SLC39A11Q8N1S5 342 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 TCEANC2Q96MN5 208 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 MTA3Q9BTC8 594 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 CYP26B1Q9NR63 512 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 TBC1D22BQ9NU19 505 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 RBM28Q9NW13 759 aaKnown RBP10.46□□□□□ -0.73
NEDD8-206ENST00000531430 INPP5FQ9Y2H2 1132 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 PCDHA10Q9Y5I2 948 aa10.46□□□□□ -0.73
NEDD8-206ENST00000531430 ZBTB42B2RXF5 422 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 DHX15O43143 795 aaKnown RBP10.45□□□□□ -0.74
NEDD8-206ENST00000531430 ZBTB43O43298 467 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 CHMP2AO43633 222 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 KLRC2P26717 231 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 SREBF1P36956 1147 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 CLCN5P51795 746 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 FGD1P98174 961 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 PRR16Q569H4 304 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 CREB3L3Q68CJ9 461 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 ZDHHC14Q8IZN3 488 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 LPPQ93052 612 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 HINFPQ9BQA5 517 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 ADAMTS10Q9H324 1103 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 MAFBQ9Y5Q3 323 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-206ENST00000531430 FAM186AA6NE01 2351 aa10.45□□□□□ -0.74
NEDD8-206ENST00000531430 A0A0U1RQF3 1178 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 GOLGA8AA7E2F4 631 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 GOLGA8BA8MQT2 603 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 EOMESO95936 686 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 TWF2Q6IBS0 349 aaKnown RBP10.44□□□□□ -0.74
NEDD8-206ENST00000531430 ZNF746Q6NUN9 644 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-206ENST00000531430 NIPA1Q7RTP0 329 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 OTOP3Q7RTS5 596 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 SIX5Q8N196 739 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 MRPL9Q9BYD2 267 aaKnown RBP10.44□□□□□ -0.74
NEDD8-206ENST00000531430 GCOM2Q9BZD3 368 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-206ENST00000531430 GLT8D2Q9H1C3 349 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 ANO2Q9NQ90 1003 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 DZANK1Q9NVP4 752 aa10.44□□□□□ -0.74
NEDD8-206ENST00000531430 BARHL2Q9NY43 387 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms