RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SFI1A8K8P3 1242 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 PSMD14O00487 310 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 MEIS2O14770 477 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 TEX33O43247 280 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 C21orf2O43822 256 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 EDIL3O43854 480 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 KIF5CO60282 957 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 DKK1O94907 266 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 TUBBP07437 444 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 RPA1P27694 616 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 CASP1P29466 404 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 CDC25AP30304 524 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 HNRNPH3P31942 346 aaKnown RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 CASP14P31944 242 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 CYLC1P35663 651 aaPredicted RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 SLC16A2P36021 539 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 CCT6AP40227 531 aaKnown RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 KRT83P78385 493 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 ZBED6P86452 979 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 FKBP3Q00688 224 aaKnown RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 SETQ01105 290 aaPredicted RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 GHRHRQ02643 423 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 RBL2Q08999 1139 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 IKQ13123 557 aaPredicted RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 MEA1Q16626 185 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 MAN2A1Q16706 1144 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 UBE2SQ16763 222 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 EDRF1Q3B7T1 1238 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 FAM26FQ5R3K3 315 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 TRIM65Q6PJ69 517 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 SYT10Q6XYQ8 523 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 NIPA1Q7RTP0 329 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 KRT26Q7Z3Y9 468 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 IRF2BP1Q8IU81 584 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 CLEC10AQ8IUN9 316 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 ZFPM1Q8IX07 1006 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 SMYD4Q8IYR2 804 aaPredicted RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 MYOCDQ8IZQ8 938 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 ETNPPLQ8TBG4 499 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 ZNF507Q8TCN5 953 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 NEK9Q8TD19 979 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 ZBED3Q96IU2 234 aaPredicted RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 CNOT6LQ96LI5 555 aaKnown RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 PNMA5Q96PV4 448 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 NUP88Q99567 741 aaPredicted RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 FEZ1Q99689 392 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 DUSP9Q99956 384 aaKnown RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 POLR3CQ9BUI4 534 aaPredicted RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 RANBP17Q9H2T7 1088 aaKnown RBP6.16□□□□□ -1.42
PCF11-205ENST00000530906 VCPKMTQ9H867 229 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 TUFT1Q9NNX1 390 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 TAB2Q9NYJ8 693 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 PIM2Q9P1W9 311 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 FAM184BQ9ULE4 1060 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 ZBTB21Q9ULJ3 1066 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 KCNH4Q9UQ05 1017 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 DAAM1Q9Y4D1 1078 aa6.16□□□□□ -1.42
PCF11-205ENST00000530906 MYMKA6NI61 221 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 EFCAB8A8MWE9 144 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 GCOM1H8Y6P7 765 aaPredicted RBP6.15□□□□□ -1.42
PCF11-205ENST00000530906 DYRK3O43781 588 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 POLR2MP0CAP2 368 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 GAP43P17677 238 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 CASQ1P31415 396 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 KRT9P35527 623 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 CAP2P40123 477 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 MTIF2P46199 727 aaKnown RBP6.15□□□□□ -1.42
PCF11-205ENST00000530906 ATP1A2P50993 1020 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 CACNB3P54284 484 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 ADKP55263 362 aaKnown RBP6.15□□□□□ -1.42
PCF11-205ENST00000530906 ZNF280AP59817 542 aaPredicted RBP6.15□□□□□ -1.42
PCF11-205ENST00000530906 SPIRE1Q08AE8 756 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 NCBP1Q09161 790 aaKnown RBP6.15□□□□□ -1.42
PCF11-205ENST00000530906 TBC1D8BQ0IIM8 1120 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 STK4Q13043 487 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 GRIK4Q16099 956 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 GLIPR1L2Q4G1C9 344 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 ZCWPW2Q504Y3 356 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 ARHGAP29Q52LW3 1261 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 ANKRD40Q6AI12 368 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 CIAPIN1Q6FI81 312 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 MCF2L2Q86YR7 1114 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 FMNL3Q8IVF7 1028 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 ZC3H3Q8IXZ2 948 aaKnown RBP6.15□□□□□ -1.42
PCF11-205ENST00000530906 KIAA0895Q8NCT3 520 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 JDP2Q8WYK2 163 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 DNAJC19Q96DA6 116 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 SUSD3Q96L08 255 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 PSMG3-AS1Q96PY0 264 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 NOC4LQ9BVI4 516 aaKnown RBP6.15□□□□□ -1.42
PCF11-205ENST00000530906 WDR11Q9BZH6 1224 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 TSGA10Q9BZW7 698 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 VPS16Q9H269 839 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 HAUS4Q9H6D7 363 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 LUC7LQ9NQ29 371 aaKnown RBP6.15□□□□□ -1.42
PCF11-205ENST00000530906 PANK4Q9NVE7 773 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 ARGLU1Q9NWB6 273 aaPredicted RBP6.15□□□□□ -1.42
PCF11-205ENST00000530906 SEL1LQ9UBV2 794 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 DNM3Q9UQ16 869 aa6.15□□□□□ -1.42
PCF11-205ENST00000530906 UBE4BO95155 1302 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms